| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0480 |
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| Symbol | rplA |
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| ID | 6091890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 476450 |
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| End bp | 477151 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642487662 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001738519 |
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| Protein GI | 170288281 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.841279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGAAGC ACTCCAAGAG GTATCTTGAA GCAAGGAAAC TGGTGGACAG AACAAAGTAC
TACGATCTTG ACGAAGCCAT AGAACTCGTT AAAAAAACTG CCACGGCGAA ATTCGATGAA
ACGATAGAAC TCCACATTCA AACTGGAATA GACTACAGGA AACCTGAACA GCACATCAGA
GGAACGATCG TGCTTCCACA CGGGACAGGT AAGGAAGTCA AGGTTCTGGT GTTTGCCAAA
GGTGAAAAGG CAAAAGAGGC TTTGGAAGCG GGCGCGGATT ACGTAGGAGC TGAGGATCTT
GTAGAAAAAA TAGAAAAAGA AGGTTTTCTC GATTTCGATG TTGCAATAGC CACACCTGAT
ATGATGAGAA TAATCGGAAG GCTCGGAAAG ATTCTGGGAC CAAGAGGTTT GATGCCATCG
CCCAAATCAG GAACGGTAAC TCAGGAAGTA GCAGAAGCGG TTAAAGAGTT TAAAAAAGGA
AGAATCGAGG TCAGAACGGA CAAAACTGGG AACATCCACA TACCCGTTGG TAAGAGGAGC
TTTGATAACG AGAAACTGAA GGAAAACATA ATCGCGGCAA TAAAACAGAT CATGCAGATG
AAACCCGCAG GTGTGAAAGG ACAGTTCATT AAAAAAGCGG TTTTGTCTTC TACAATGGGA
CCCGGTATAA AGTTGAATCT TCAGAGCCTG TTGAAAGAGT AA
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| Protein sequence | MPKHSKRYLE ARKLVDRTKY YDLDEAIELV KKTATAKFDE TIELHIQTGI DYRKPEQHIR
GTIVLPHGTG KEVKVLVFAK GEKAKEALEA GADYVGAEDL VEKIEKEGFL DFDVAIATPD
MMRIIGRLGK ILGPRGLMPS PKSGTVTQEV AEAVKEFKKG RIEVRTDKTG NIHIPVGKRS
FDNEKLKENI IAAIKQIMQM KPAGVKGQFI KKAVLSSTMG PGIKLNLQSL LKE
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