| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0161 |
|---|
| Symbol | |
|---|
| ID | 6091563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | + |
|---|
| Start bp | 154719 |
|---|
| End bp | 155513 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642487342 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001738205 |
|---|
| Protein GI | 170287967 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000199077 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTCA AGGTGAAAGA TCTCAGAAAG TTCTACGGGG AAAAAGCGGC CGTGGACGGC
ATCAGTTTCG AAGTGGAAAA AGGAGAGATC TTTGCCATAC TCGGTCCAAA CGGTGCCGGT
AAAACAACGA CTCTGAAGTG CATCACAGGT TTGAGAAGGA AAAACTCCGG AGAGATCGAA
CTGAACGGCA CGTTCACTTA TCTACCGGAG GAGAAGAAGC TCTATCCGTA TCTCAGAGTG
AAAGAGATCA TCGATCTCTT CGAGAAGATA GGGAAGGACT TCAACAAGAA AAACTGCCTC
GAACTTCTCG AAAGGTACAG AATAGACCTG AACGAGAAGG TGACCAATCT CTCGCACGGT
ATGAGAACTA TTCTCTACCT TTCACTCGTT TTCTCTGAGA ACGTGGATCT CTACATACTG
GACGAACCCA CCTGGGGACT CGATCCCCTC GTGCGAAACG AGGTACTCGA TCATATAAGG
TCCCTCACCT TCGAAGGCAA ATCCGTTCTG TACACAAGTC ACGTTCTGGC AGAAGTGGAA
AAGATCGCAG ACAGAGTTGC CATCATGAAG GAAGGAAAGA TCATCTTGAC GGGAAGCCTC
GACGACATAA AGTCCTCTTA CAGCCTTGTG GTTTCCAAAG AGGATCTGAA CGGTTATCTT
CTGAAAACTC TCAAAAGTGG AGAAAAAGTT TACCTTATGA AAAAGGAAGA AGCCCCTGAA
GGTGTGGAGA TCGAAGAAGC AACCTTTGAA GACATATTCA AAGCGATTGT GAGGGGTGAG
AGAAATGATC GTTAA
|
|---|
| Protein sequence | MILKVKDLRK FYGEKAAVDG ISFEVEKGEI FAILGPNGAG KTTTLKCITG LRRKNSGEIE
LNGTFTYLPE EKKLYPYLRV KEIIDLFEKI GKDFNKKNCL ELLERYRIDL NEKVTNLSHG
MRTILYLSLV FSENVDLYIL DEPTWGLDPL VRNEVLDHIR SLTFEGKSVL YTSHVLAEVE
KIADRVAIMK EGKIILTGSL DDIKSSYSLV VSKEDLNGYL LKTLKSGEKV YLMKKEEAPE
GVEIEEATFE DIFKAIVRGE RNDR
|
|---|
| |