| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3873 |
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| Symbol | |
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| ID | 4074936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008042 |
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| Strand | + |
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| Start bp | 127810 |
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| End bp | 128979 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638004530 |
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| Product | mannonate dehydratase |
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| Protein accession | YP_611265 |
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| Protein GI | 99078006 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1312] D-mannonate dehydratase |
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| TIGRFAM ID | [TIGR00695] mannonate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.432429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAAA CCTGGCGCTG GTTCGGCCCG AATGACCCCG TAACACTGAC CGACATTCGT
CAGGCCGGGG CTACTGGCGT TGTAACGGCA CTGCACTCTC TCCCCAATGG TACCGTATGG
CCAGTCGAGG AGATTGTCGC ACGCCGTGAC ATGATCACCG CTGCCGGCCT CAACTGGGAT
GTAGTCGAAA GCGTGCCCGT TCACGAAGAC ATCAAACGCG CAGCACCAGG GTGGGAAGAA
AAGGCGGACG CGTGGGCACA ATCTATACGC AACCTCGCAG CCTGTGGCAT TAAAACTGTG
TGCTATAATT TCATGCCGCT GTTGGATTGG ACCCGAACAG ACCTGACGCA CCCCCTTTCT
GATGGTGCGC TGTGCCTACG GTACGACGCA GTGGATGCGG CAGTGTTTGA TATTCATATC
CTCACCCGGG TCGGCGCTGA TGCAGAACAT AGGCCGGAGA TCGTACAACG CGCAACTGAG
CGCTTTACCA AGATGACAGA AACGGAATGC GAGGCACTAA CGCAGACCAT CCTCGCCGGA
CTACCCGGGG CTGAAGAGAG CTTTGACATC AATAGCTTCC GATCACATCT TGCTCTTTAC
AACGATATTG ATGCGACCAG ACTGCGGGCT AACCTGGCCG CCTTCCTTCA ACGTGTAGTG
CCTGTGGCGG AAGAGGTGGG CGTCAGGTTG GGGATCCATC CAGACGACCC CCCCTTCCCC
ATTTTTGGCC TACCACGTGT AGTTTCTACC GCGGAGGATT TGGACCACAT CATCCAGGTT
TACGAAAGCC CCTCAAACGG CCTGACGTTT TGTACCGGAT CGCTGGGCGT GCGTGCGGAC
AATAATCTAC CGGCCATGCT GACGCGCTTC GGGAAGCATG TAAATTTTCT CCACCTGCGC
GCCACACAGC GCGAGGAGGA TGGTATCAGT TTTCACGAAG CCCCTCATCT GCTCGGCAAC
GTCGATATGG TCGCAGTATG TAAGGCCGCG CTGGCCGCAG AGGCCGTAGG GGATCGCGAG
CTACCATTCC GGCCAGACCA CGGCCATATG CTCGCCCATG ATCAACGCGT CAGTAGTACT
CCGGGCTATC CCTACATTGG GCGCTTGCGT GGCCTGGCAG AATTGAGGGG AGTACTCCAC
ACGCTAGCTT GGCTACAAAA AGACGACTGA
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| Protein sequence | MIETWRWFGP NDPVTLTDIR QAGATGVVTA LHSLPNGTVW PVEEIVARRD MITAAGLNWD
VVESVPVHED IKRAAPGWEE KADAWAQSIR NLAACGIKTV CYNFMPLLDW TRTDLTHPLS
DGALCLRYDA VDAAVFDIHI LTRVGADAEH RPEIVQRATE RFTKMTETEC EALTQTILAG
LPGAEESFDI NSFRSHLALY NDIDATRLRA NLAAFLQRVV PVAEEVGVRL GIHPDDPPFP
IFGLPRVVST AEDLDHIIQV YESPSNGLTF CTGSLGVRAD NNLPAMLTRF GKHVNFLHLR
ATQREEDGIS FHEAPHLLGN VDMVAVCKAA LAAEAVGDRE LPFRPDHGHM LAHDQRVSST
PGYPYIGRLR GLAELRGVLH TLAWLQKDD
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