Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3787 |
Symbol | |
ID | 4074882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | - |
Start bp | 37024 |
End bp | 37380 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638004447 |
Product | nucleic acid binding, OB-fold, tRNA/helicase-type |
Protein accession | YP_611182 |
Protein GI | 99077923 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 0.133033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCACG TATTTCAGTT CATTTCAGCA CTAGGCGTTG CACTGTTTCT CACAACCTGC GTCAACGCGG AGACTATCGG CCCTCGTGAA GCAGCTCAGA ACATAGGAAG CTACTCGACG GTTGAAGGAG TGGTTTCTCA AGTGTCGAGA AGTCGGAATG GCACGACCTT TATCAACTTC GGCGGTCGCT TTCCCAATCA TGTCTTTTAT GGCGTCATTT TCAAGAAACA CGCGCATAAG TTCCAAAATC TAGACGGTCT AGTTGGGAAA TCCGTAGCTA TAGGTGGAAC CATCAACCTC TACAAAGGTA AGCCCCAGAT CATAGTGTTT TCACCAGAAC AGATCACACA ACGATAA
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Protein sequence | MRHVFQFISA LGVALFLTTC VNAETIGPRE AAQNIGSYST VEGVVSQVSR SRNGTTFINF GGRFPNHVFY GVIFKKHAHK FQNLDGLVGK SVAIGGTINL YKGKPQIIVF SPEQITQR
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