7 homologs were found in PanDaTox collection
for query gene TM1040_3787 on replicon NC_008042
Organism: Ruegeria sp. TM1040



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008042  TM1040_3787  nucleic acid binding, OB-fold, tRNA/helicase-type  100 
 
 		 118 aa  240  6e-63  Ruegeria sp. TM1040  Bacteria  normal  0.133033  normal  1 
 
 
-
 
NC_008009  Acid345_1837  nucleic acid binding, OB-fold, tRNA/helicase-type  28.97 
 
 		 169 aa  53.1  0.000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007955  Mbur_1900  nuclease (SNase-like)  36.04 
 
 		 266 aa  48.1  0.00004  Methanococcoides burtonii DSM 6242  Archaea  normal  0.898699  n/a   
 
 
-
 
NC_011071  Smal_1848  putative secreted protein  31.97 
 
 		 127 aa  46.2  0.0002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.163717 
 
 
-
 
NC_008757  Pnap_4375  hypothetical protein  33.98 
 
 		 335 aa  44.7  0.0005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0453814  normal  1 
 
 
-
 
NC_008781  Pnap_0625  hypothetical protein  33.98 
 
 		 335 aa  44.7  0.0005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.192003  normal  1 
 
 
-
 
NC_011899  Hore_04500  nuclease (SNase domain protein)  33.7 
 
 		 276 aa  42  0.003  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
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