Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3752 |
Symbol | |
ID | 4075459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 809901 |
End bp | 810713 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638005272 |
Product | hypothetical protein |
Protein accession | YP_611981 |
Protein GI | 99078723 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATT GGTCCGGCGG CAACGATACA GGGCCCACAC CGCGCCGGGA TGCGATCTGG GCCTGTGTGG TCCGCGCCGG AGAAGCACAG GCGCCGGTCT ATCTGCGCAA CAGGCAACTG GCCTCGGACT GGCTCAAGGA CCTCGTTGAT AGCGAGCTAC GCGCTGGAAG GCGCCTGGCA ATAGGGTTCG ATTTCCCCTT TGGCTACCCG CAGGGTTTTG CCGCGGCGCT CACGGGGGAG GCAGATCCAC TTGTACTGTG GCAGTGGTTT GCAGACCGGA TCGAGGATGC GCCAAAGCTC AACAACCGAT TTGATCTCGC GGGCGACATC AATCTGCGTC TTCAGCCCGG AGGGCAGGGC GAGGGACCCT TTTGGGGCAA TGGCCTGAAA CGCGATATCG CCGGTCTGCC GCGCCGCAAA ACACAGTATC ACAACCCCTT TGCGGAGCGC AGACAGGTGG AATACCGCGC CAAGGGCAGC TTTACCTGCT GGCAGATGTC CGGTGCGGGC TCGGTCGGAG GGCAGGTCAT GATGGGCTTG CCGGTCCTGC AGCGGTTGCG GCGTGAATTT GCCCCCCATG TCTCCGTCTG GCCCTTCGAG CCTCTGGAGA CCCCGGTCGC GCTGTTAGAG ATCTGGCCAT CACTCACGGT TGGTGCCTGT CCAGACGGGT GGATCAAAGA CGCATGGCAG GTACATTCTG TTGCTCTGGA CCTTGCGGGG CTGCCTGTGG CAGACCTGAA CCGTTATCTG ACCGTGACTG CCCCCATTGC ATTGGAAGAG GGCTGGATTT TCGCTGTGGA GCCTGATCGA TGA
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Protein sequence | MLDWSGGNDT GPTPRRDAIW ACVVRAGEAQ APVYLRNRQL ASDWLKDLVD SELRAGRRLA IGFDFPFGYP QGFAAALTGE ADPLVLWQWF ADRIEDAPKL NNRFDLAGDI NLRLQPGGQG EGPFWGNGLK RDIAGLPRRK TQYHNPFAER RQVEYRAKGS FTCWQMSGAG SVGGQVMMGL PVLQRLRREF APHVSVWPFE PLETPVALLE IWPSLTVGAC PDGWIKDAWQ VHSVALDLAG LPVADLNRYL TVTAPIALEE GWIFAVEPDR
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