| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3714 |
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| Symbol | |
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| ID | 4075421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 773015 |
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| End bp | 774634 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005234 |
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| Product | hypothetical protein |
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| Protein accession | YP_611943 |
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| Protein GI | 99078685 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.114307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGA TCCTCTCCGC CCTTGAAATC CTGATGCGCT GGGACGTGGC GCTGGCGCTG
CTGGCAGGTT CTGTTGGCGG GGTACTGATC GGGGCGATCC CCGGCGTAGG CCCGGCCGTT
GCCATCGCGA TCCTGCTACC TGCGACCTTT TCGCTCGATC CGATCGTGGG GCTCACGGTG
CTCTTGGGGA TCTATGGGTC CTCCATGTAT GGCGGTGCGA TCCCGGCGAT CCTGATCAAT
ACGCCCGGCA CTGCGGTCAA CGCGCTGACG ACCTATGACG GCTACCCGAT GACGGCCCGC
GGCGAGCCTC GGCGCGCCCT TAGCCTTGCC TATTCCGCGA GCTTCTTTGG CGGCATCTTT
TCGGTGATCT GTCTGATCCT CTTTGCGCCC GTACTGGCCA AGGTGGCGCC GCTCTTTGGC
GCGCGCGAAA TTTTTCTCGC AGCCCTTCTC GGACTCATTC TGGTGGTGGT CGCACACCGG
GGCCAAGCCC TGATAGCCGG GGCGCTCGCG TGCCTTGGGA TCTTTCTCAA TACGATCGGC
ATGGAGCCGG TGAAATACAC CCAACGCTAC ACCTTTGGAA CGGATGCGCT GGGGTCAGGC
ATCAATCTCA TCGTGGTGGT GCTGGGGCTT TTTGCGATCT CGCAGGCCTT TATCCTCTTG
ACCGATGAGG ATGAGAAAAT CCGCCTCACC AAGCTGCGCG GTGGAGTGTT TCAAGGTCTG
CGCGAGCTGG CGCGCCACCC GCGGGTGGCG TCTGTTTCGG CGGGCTTTGG CGTGGTGATG
GGAATGATCC CGGGCGTGGG TGAGTTCACG GCGCAGTTCA TGTCCTATAC CTACGCGCAA
AAGACCTCAA AACGGCCGCA GGATTTTGGC AATGGCTCCT CTGAGGGGCT GATCGCTGCC
GAAACCGCCA ATAACGCCGT GCCCGCTGCT GCCATGGTGC CGCTTCTCGC GCTTGGCATT
CCGGGCGAGG CGCTGACAGC GATGATGCTT TCGGTCTTTT ACGTCCACAA TGTCGTGCCA
GGGCCGGGGC TGTTCCAAAA CCAGATGGAT TTTGTCGTCG CGCTTTATCT GGCGCTCTTG
ATCCTCAATG TGCTTGTGCT TGTCTTTCTG CTGGCGGCCA CCAAATCGCT GGTTCAAGTG
GTGCGCATTC CCAACCGCTT CCTGGGTGTC GGCATTCTCA CGCTCAGCTT TGTGGGGGTC
TATTCGCTGC GCAACTCGGT CACCGATTGC TTCATGGCAG CCGGGTTTGG GCTCTTTGGC
TTTATCCTCA AGCGGTTGCA GCTGCCCGCC GTGCCGATCA TCCTCGGCAT GGTTCTGGGC
GGCATCATGG AAGTGAAACT GCGCGCCGCC ATGGCACGGG TAAAGACTCC CTTTGATTTC
ATTGATCGCC CGGTGGCGTT CATCCTGTTT TCCCTCATCT TGATCGTGCT TGCGGCGCAT
CTCTTTCGTA TCGTGAAAGA GGCGCGCGAG CTGAAGGAGG CCGAATGGCA AACCAAGACC
TCATCAACAC GCTTCGGAGC ACTGCTGTTG CGCCGCAGAG CCTCTTTCTT GAAGGAACAT
GGCAAGAAGG TTCGGGCGCG CCATGCGAGA CTACTTCGCC GATTGACGGA TCTGTTCTGA
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| Protein sequence | MDLILSALEI LMRWDVALAL LAGSVGGVLI GAIPGVGPAV AIAILLPATF SLDPIVGLTV
LLGIYGSSMY GGAIPAILIN TPGTAVNALT TYDGYPMTAR GEPRRALSLA YSASFFGGIF
SVICLILFAP VLAKVAPLFG AREIFLAALL GLILVVVAHR GQALIAGALA CLGIFLNTIG
MEPVKYTQRY TFGTDALGSG INLIVVVLGL FAISQAFILL TDEDEKIRLT KLRGGVFQGL
RELARHPRVA SVSAGFGVVM GMIPGVGEFT AQFMSYTYAQ KTSKRPQDFG NGSSEGLIAA
ETANNAVPAA AMVPLLALGI PGEALTAMML SVFYVHNVVP GPGLFQNQMD FVVALYLALL
ILNVLVLVFL LAATKSLVQV VRIPNRFLGV GILTLSFVGV YSLRNSVTDC FMAAGFGLFG
FILKRLQLPA VPIILGMVLG GIMEVKLRAA MARVKTPFDF IDRPVAFILF SLILIVLAAH
LFRIVKEARE LKEAEWQTKT SSTRFGALLL RRRASFLKEH GKKVRARHAR LLRRLTDLF
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