| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3707 |
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| Symbol | |
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| ID | 4075676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 765971 |
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| End bp | 766849 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005227 |
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| Product | phosphonate ABC transporter permease |
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| Protein accession | YP_611936 |
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| Protein GI | 99078678 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
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| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.324444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATC TGACCGCTCA GGCCCCCGGA TCGGTGGCTG AGATCAAGGC GCAATACGCC
GATCTCACCC GTCGCAAGCG CATCTATGGC GGGGTGCTTC TGGCCCTCTT CATCGCGCTT
ATGGTGGCGG GGTTTCGCAC CGCCGATGAC CGCAACGCAG GCTCGTTTGC AGATGGGTAT
CAGCGCATCT TTGACTACCC CGCTGAGGTG CTCTCTGAAG CGGTGGAGAA AATCGCCGAG
CTTCCGGCCC ATGTGGTTCA CTTTCTGCCC GCACTGATCG AGACCTTGAA TATTGCCGGG
GCCTCCACGC TCATCGGTGC AATCTTCGGC ACGCTTTTGT CCCTGCTTTC CACCCGGGGC
ATGGCGCCTT GGCCCGCGCT CATTCCACTG TTTCGCCGTA TCATGGACAT TTGCCGCGCG
ATCCCGGAAA TCGTGATCGC CCTGGTGCTG ATTTTCCTTT TGGGGGGTGG CCCGGTGCCA
GCGATGATCG CTATCGCGAT CCACACGGCG GGCGCCTTGG GCAAGCTGTT CTCCGAAGTA
AATGAAAACG CCTCGCTCAA GCCTGTCGAG GGCCTCAATT CGACCGGGGC CTCCTGGGCA
CAACGCATGT GGCTTGGGGT GATCCCTCAG GTGGGGCCGA ATTATGTGTC CTATGCGCTC
CTGCGGTTTG AGATCAACAT TCGCGCCTCC GCGATCCTCG GCTTCGTGGG CGCAGGCGGG
ATTGGCTACG AGCTCAAGAA TTCGATGTCC TGGGGACAGG GCAAATATGA CGAAGCTGCC
GCGATCTTCA TCCTGCTCTT TGTGACCATC GTGGTGGTGG ACCAGATCTC TGGCACGCTG
CGTGACCGTT TGACCCACGG CAACCGGAAA GGGGCCTGA
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| Protein sequence | MADLTAQAPG SVAEIKAQYA DLTRRKRIYG GVLLALFIAL MVAGFRTADD RNAGSFADGY
QRIFDYPAEV LSEAVEKIAE LPAHVVHFLP ALIETLNIAG ASTLIGAIFG TLLSLLSTRG
MAPWPALIPL FRRIMDICRA IPEIVIALVL IFLLGGGPVP AMIAIAIHTA GALGKLFSEV
NENASLKPVE GLNSTGASWA QRMWLGVIPQ VGPNYVSYAL LRFEINIRAS AILGFVGAGG
IGYELKNSMS WGQGKYDEAA AIFILLFVTI VVVDQISGTL RDRLTHGNRK GA
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