| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3680 |
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| Symbol | |
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| ID | 4075649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 734296 |
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| End bp | 737715 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005200 |
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| Product | 2-oxoacid ferredoxin oxidoreductase |
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| Protein accession | YP_611909 |
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| Protein GI | 99078651 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC TGTCCCACGC CTTTGAGACT TACCAGCTTG AGGATCGCTA TGCCCGCACC
AAGGGGCGGG TGTTCCTAAC CGGCACGCAG GCTCTGGCGC GGATCATGCT GGATCAGGCC
CGGCGCGACC GTGCGGCGGG GTTGAATACC GCAGGCTTTG TCTCTGGCTA TCGCGGCTCG
CCGCTGGGCG GCGTGGATCT TGAATTTTGG CGCGCCCGTG CCCGCATGGA GGAGGCTGGA
ATCACCTTCA TGCCTGCCGT CAACGAAGAC CTCGGCGCAA CGGCGGTTCT GGGCGCGCAG
CAAGCTGTTC TGGACCCCGA TTGCGAGGTC GAGGGCGTGT TTTCCATGTG GTACGGCAAG
GGGCCCGGCG TGGACCGCTC TGGCGATGCG CTGAAACATG GCAATGCCTA TGGCTCCTCC
GCCAAGGGCG GCGTGTTGGT CGTCGCGGGC GACGATCATG GCTGCGTGTC CTCGTCGATG
CCGCATCAAT CCGATGTGGC CTTCATGTCT TGGTTCATGC CGGTGCTGAA CCCGGCCGAC
GTGGGAGAGT TCCTGTCCTT CGGTGAATAT GGCATCGCGC TTTCGCGCTA TTCCGGCACC
TGGGTGGGCT TCAAGGCGGT TTCCGAAACC GTGGAAAGCG GCCGTTCGGT CGAACTGCCC
GAGGATCGTG ACTTTATCCG GCCTGAATTG CCGGACTATC CCGGCGGGCT GCACATCCGG
TCTTCTGACC TTCCAAGCCC CGAGATCGAG ACCCGTATTC GCGCTAAACT TCAGGCCGTG
CGGGCCTTTG CCGAGGCCAA CCCGATCGAC CGGCGCATCT ATGATCTGCC AGAGGCCCGC
TTTGGCATCG TCACCACCGG CAAGGGCTAT CTCGACCTGA TGGAGGCGCT GCGTCTACTG
GACCTGAACG AGGACACTTG CCGCCGTTTG GGCATCGACA TCTACAAGGT TGGCATGGTC
TGGCCCCTCG CCCGCGCCGA GGCGCTGCGC TTTGTGAAGG GCAAAGAAGA GGTGCTGGTG
ATCGAGGAAA AACGCGGCAT CATCGAGAGC CAATTCAAGG AGTATTTCTA CGACTGGCCC
GGTGACAAGC CCAAGAAAAT GGTAGGCAAA TACCACGCCG CGGGCGAGCC GCTGATCCCA
TGGGTGGGCG AGTTGAGCCC CCTTATGCTG GTGCCGGTGG TGGCAGAGCG TCTTGATCGT
TTCTTCCCAG AGCTGAAGCT GCGCGACAAG GCCCGCGCCC TGACCGAGCA ACCGCCCAAC
CTGCTCAATA TCCCCGGCGC CACGCGCACG CCCTATTTCT GCTCGGGTTG TCCGCACAAC
ACCTCGACCA AAGTCCCCGA GGGCTCCACT GCCAACTCCG GTATTGGCTG TCATGTCATG
GCCTCGTGGA TGGGCCGCAA CACCGCAGGC TATGCGCAGA TGGGCGGCGA AGGTGTGCCG
CATGTGGTCG CGTCGAAATA CAACGGCGGC AAACATGTGT TCCAGAACCT TGGCGAAGGC
ACATGGTATC ACTCCGGCTC GCTCGCGATC CGTCAGGCGG TGGCCTCAGG GGCGAATATC
ACCTTCAAGG TGCTCTATAA TGACGCAGTG GCCATGACTG GCGGTCAACC CGTGGACGGA
CCGGTTTCCG TTGCAGGCAT CGCGCAGGCC GGTCGCGCCG AAGGCGTGGA GCGCATCGCG
CTGATCTCTG ATGATATCGC CAAATTCACC CGCAGCGACT TCCCGGCGGG CACGTCTTTT
CACGATCGTG CCGACCTCGA TCTGGTCCAG CGCGAGCTGC GCGAAATCAA GGGCGTCACC
CTCCTGATAT ACGAACAGAC CTGCGCCACC GAGAAACGCC GCCGCCGCAA ACGCGGCAAG
ATGGAAGACC CCAAGCGCTT TGCCTATATC AACGACCTGG TCTGCGAAGG CTGTGGGGAT
TGCTCTGTCG AGAGCAACTG CCTCAGCGTC GAACCCAAAG ACACGCCCTT TGGCCGCAAG
CGCAAAATCA ACCTCTCCAG CTGCAACAAG GATTTTTCCT GCCTCAACGG GTTTTGCCCC
AGCTTTGTGA CAGTAGAGGG CGCAACCCGG CGGAAACGGG AATTGAAGGA TCTCGATCCG
GCAGCGCTCA CGGTGGATTT GCCAGCACCC GACCTGCCCG CTCTTGGCAA ACCCTTTGAT
CTTTTGGTGA CGGGTGTCGG CGGCACGGGG GTTGTCACCG TTGGGGCGCT GATCACCATG
GCGGCCCACC TTGAGGGCAA AGGATCATCG GTGCTGGACT TTACCGGCTT TGCGCAGAAA
TTCGGCACCG TCCTGAGCTA TATCCGCCTC GCCAAATCGC CCGAGGAGGT CCATCAGGTG
CGCACAGATC TTTGTGCCGC CGATGCGGTC ATCGCCTGCG ACGCGGTGGT CTCCTCCGCC
CCAAAAGCCT CGGCGCATTA TCGCGAGGGC AGCCGCGTGG CGCTGAACCT TGCGGAAATG
CCCACCGGCG ATATCGTTTT GCGCCGTGAT GCGTCGCTCG ACATTCCGGC CCGCGCCCGG
GCAGTGGCCT CGGTGGTGGG CGCAGGGAAT GTCACGGCTC TGAACGCCAA TGCGATCGCC
GAGACGCTGC TTGGCGATGC GGTTCTGGCG AATGTCATCA TGCTTGGGTT CTCTTGGCAG
CAGGGGCTTG TCCCCGTCAG CCTCACCGCA CTACAGCAGG CGATCGTTCT CAATGGCGTT
GCGATTGAGA AAAACCAACT CGCCTTCGCC ATCGGGCGTG CGATGGCCGC CGCGCCAGAG
CGCCTCGCCG CGCACTACAG CGAAACTGAA GCGACAGAAG AGTCGCTTCA GGACCTGATC
AAGCGTCGCG TCTCGTTCCT CACCGCTTAT CAGAACGAGG ACTATGCCGG GATCTATTCG
GACCTCCTGC AGCGCCTGCA CCGTGCACTT CCCGCGAACC ACGCAGATCG GCTCACCGCG
TCGGCGGCCC GCAGCCTCTT CAAGCTGATG GCCTACAAGG ATGAATTCGA GGTGGCGCGC
CTGATGAGCG GCAAGAGCTT TCGCGATGAA CTCGACCGCA CCTTTGCGGG TGACTTCAAG
GTCAACTACC ACTTGGCGCC ACCGCTCTTG AACATCAAAA CGGATGCCCG TGGCCGTCCC
GCCAAACGTG CCTTCGGTCA ATGGATGACG CCGGTTCTGT CGCTTCTCTC CAAGGGGAAA
GCCCTGAGAG AGACACCCTT CAACCCGTTC GGCTATCACT CTGAGGCGCG TATGCACCGC
GAACTTCGGG ATTGGTTCCA GAATATGCTG GAGGACATCA TCTCCCACCC CACGGCGCTT
GCTCCGGATA TGCTGGACAC AACTCTAAAA GCGCCGATGG ACATTCGCGG CTACGGCCCC
GTGCGCGAGG CGGCAGCGCA AAAAGTCAAA CAGGAGGTCG ATGCTCTGCG TCTGACCTGA
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| Protein sequence | MTELSHAFET YQLEDRYART KGRVFLTGTQ ALARIMLDQA RRDRAAGLNT AGFVSGYRGS
PLGGVDLEFW RARARMEEAG ITFMPAVNED LGATAVLGAQ QAVLDPDCEV EGVFSMWYGK
GPGVDRSGDA LKHGNAYGSS AKGGVLVVAG DDHGCVSSSM PHQSDVAFMS WFMPVLNPAD
VGEFLSFGEY GIALSRYSGT WVGFKAVSET VESGRSVELP EDRDFIRPEL PDYPGGLHIR
SSDLPSPEIE TRIRAKLQAV RAFAEANPID RRIYDLPEAR FGIVTTGKGY LDLMEALRLL
DLNEDTCRRL GIDIYKVGMV WPLARAEALR FVKGKEEVLV IEEKRGIIES QFKEYFYDWP
GDKPKKMVGK YHAAGEPLIP WVGELSPLML VPVVAERLDR FFPELKLRDK ARALTEQPPN
LLNIPGATRT PYFCSGCPHN TSTKVPEGST ANSGIGCHVM ASWMGRNTAG YAQMGGEGVP
HVVASKYNGG KHVFQNLGEG TWYHSGSLAI RQAVASGANI TFKVLYNDAV AMTGGQPVDG
PVSVAGIAQA GRAEGVERIA LISDDIAKFT RSDFPAGTSF HDRADLDLVQ RELREIKGVT
LLIYEQTCAT EKRRRRKRGK MEDPKRFAYI NDLVCEGCGD CSVESNCLSV EPKDTPFGRK
RKINLSSCNK DFSCLNGFCP SFVTVEGATR RKRELKDLDP AALTVDLPAP DLPALGKPFD
LLVTGVGGTG VVTVGALITM AAHLEGKGSS VLDFTGFAQK FGTVLSYIRL AKSPEEVHQV
RTDLCAADAV IACDAVVSSA PKASAHYREG SRVALNLAEM PTGDIVLRRD ASLDIPARAR
AVASVVGAGN VTALNANAIA ETLLGDAVLA NVIMLGFSWQ QGLVPVSLTA LQQAIVLNGV
AIEKNQLAFA IGRAMAAAPE RLAAHYSETE ATEESLQDLI KRRVSFLTAY QNEDYAGIYS
DLLQRLHRAL PANHADRLTA SAARSLFKLM AYKDEFEVAR LMSGKSFRDE LDRTFAGDFK
VNYHLAPPLL NIKTDARGRP AKRAFGQWMT PVLSLLSKGK ALRETPFNPF GYHSEARMHR
ELRDWFQNML EDIISHPTAL APDMLDTTLK APMDIRGYGP VREAAAQKVK QEVDALRLT
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