| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3655 |
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| Symbol | |
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| ID | 4075624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 709241 |
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| End bp | 710176 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005175 |
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| Product | NLPA lipoprotein |
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| Protein accession | YP_611884 |
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| Protein GI | 99078626 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.59768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGC TCATCGCAGC GCTGGCCATG CTGGCCGCCA CCCCGGCCAT GGCGCAGGAT
AGAATGACAC TGCTCTTGGA TTGGTTCGTC AATCCCGACC ATGGCCCGAT CATTATTGCC
GAGGAAAACG GCTATTTCGC CGAACAGGGC CTCGAGGTCG AGGTTGTCGC TCCCGCAGAC
CCATCGGCCC CCCCAAGGCT CGTGGCTGCG GGTCAGGCGG ATCTGGCCGT TTCTTATCAA
CCGCAACTTC ACCTTCAGAT CCACGAAGGC CTGCCTCTGA AACGCGTCGG CACCTTGGTT
GCAACACCTC TGAACTGTCT TCTGGTGCTA AAGGATGGCC CAATTCAGGA TCTTTCAGAC
CTCGCCGGCA AGAAAATCGG CTTCTCCGTG GCCGGTGTCG AAGAGGCCGT GCTGCAAGCG
ATGCTGGGCC AGCATGGTGT CTCCTCTGAC GACATTGAGA TGATTAATGT GAACTTCTCT
TTGTCGCCCT CTCTGATGTC GGGGCAGGTT GACGCAGTCA TCGGTGCTTT TCGGAACTTT
GAGCTGAACC AGATGGAGAT CGAAGGCGTC GAGGGGCGGT GTTTCTACGT CGAAGAGGAA
GGTGTGCCTT CTTATGATGA GCTGATTTAT GTCGCCAATC CAGAGCGGAT GGACACGGAC
AAAATCGCGC GTTTCCTCGC AGCAACGGAA AAGGCGACCC AGTACATTGT GAACAACCCC
GAGAAAAGCT GGGAAATCTT TGCGGCCACC TCGACCGAGC TGCAGGACGA ATTGAATGCA
CGCGCATGGG TCGACACGCT GCCTCGCTTT GCGCTGCGCC CGGCCGGGTT TGATGCGGGC
CGCTACACAC GGTTTGAGGC CTTTCTCAAA GACAGCGGCA TGATTGACAG CTTGAACCCG
GTGGACGCCA TCGCAATCGA CGTGACTGCC CCATGA
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| Protein sequence | MKTLIAALAM LAATPAMAQD RMTLLLDWFV NPDHGPIIIA EENGYFAEQG LEVEVVAPAD
PSAPPRLVAA GQADLAVSYQ PQLHLQIHEG LPLKRVGTLV ATPLNCLLVL KDGPIQDLSD
LAGKKIGFSV AGVEEAVLQA MLGQHGVSSD DIEMINVNFS LSPSLMSGQV DAVIGAFRNF
ELNQMEIEGV EGRCFYVEEE GVPSYDELIY VANPERMDTD KIARFLAATE KATQYIVNNP
EKSWEIFAAT STELQDELNA RAWVDTLPRF ALRPAGFDAG RYTRFEAFLK DSGMIDSLNP
VDAIAIDVTA P
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