| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3605 |
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| Symbol | |
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| ID | 4075032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 654670 |
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| End bp | 655857 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005124 |
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| Product | aminotransferase |
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| Protein accession | YP_611834 |
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| Protein GI | 99078576 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.361523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA CATCCATCAC CCATCGCTTG GCAGATCTCG GCGGTGCAAA GTGGGATTTG
CATACGGCGG CACGCGACCG TTCGGACCGT GGCGAAGACA TCGTTGAGAT GACAATTGGC
GAACCGGATG TGGCCTTGCC TGAACCGCTT GCGCGTGCTG CGACACGCGC CATAGAGGCT
GGGCGGACGC AATACTCCAA CGGGCGCGGT GAAAACGGAC TGAGAGATGC GCTGGCTGAG
AGCTATAGCG CGCGGCGTGG ACGGTGTTTC GAGCGCGACA ATGTTCTGTG CTTTCCGGGG
ACACAAACAG CGCTCTATGC GGTGATGCAG GGTGTTGCCG AGACGGGTGA CGAGGTGCTG
GTGGGCGACC CGCTCTATGC CACTTACGAG GGCGTGATCC GCGCCACTGG GGCGGACATG
GTGCCAGTTC CGCTCAAGGC AGAACATGGA TTTCGGATGC AGGCCGATGA CATTGCGCAG
CGTATCACCG AACGCACCCG CGCGATTTTG CTCAATACGC CGCACAATCC GACAGGTGCG
ATTCTGCGCC CAGCTGAGCT CGAGGCGATT GCGGAGATTG CCCTGAAACA CGACCTATGG
CTGATTTCCG ACGAGGTCTA TGAAGACCTC GTGTTTGACG GCAACAGCTT TACCTCGCCA
TTGACGCTCG AGCAGATTGC AGATCGCACG ATTGCTGTGT CTTCGATTTC CAAGTCCCAT
GCCGCACCCG GTATGCGCAG TGGATGGGCA ATCGGCCCAA GAAGCTTCAT GGACGCGCTT
TTGCCGGTGT CCGAGACCAT GCTTTTTGGC AATCAACCCT TCATCGCGGA TGTCACCGAA
GAGGCCGTGC GCGCAGGTTC AACCGTGGCA GAAGGCATGC GCCAGCGGTT TGCAAAACGG
GCGCAGTATC TCGCGGACCG GTTGGAGGCG GAGACCGTCT TGCGCGTGCA TCGCCCCGAA
GCGGGGATGT TTGCGCTGGT TGACGTGAGT CCGCTCGGTA TGGATTGCGA TGCCTTTGCT
TGGGCATTGC TTGAAAACGC TGGCGTTGCC GTGATGCCTG GATCGTCTTT TGGCGCGCAT
CTGCAGAACT GGGTCAGGCT CGCTCTGACG GTCGAGGATG CAGCAATGAC CAAAGCAGTG
GACCGGATTT CAGAGTTTGC CCGCTCGGTC GCTGTTGCGG CGCAGTAG
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| Protein sequence | MKTTSITHRL ADLGGAKWDL HTAARDRSDR GEDIVEMTIG EPDVALPEPL ARAATRAIEA
GRTQYSNGRG ENGLRDALAE SYSARRGRCF ERDNVLCFPG TQTALYAVMQ GVAETGDEVL
VGDPLYATYE GVIRATGADM VPVPLKAEHG FRMQADDIAQ RITERTRAIL LNTPHNPTGA
ILRPAELEAI AEIALKHDLW LISDEVYEDL VFDGNSFTSP LTLEQIADRT IAVSSISKSH
AAPGMRSGWA IGPRSFMDAL LPVSETMLFG NQPFIADVTE EAVRAGSTVA EGMRQRFAKR
AQYLADRLEA ETVLRVHRPE AGMFALVDVS PLGMDCDAFA WALLENAGVA VMPGSSFGAH
LQNWVRLALT VEDAAMTKAV DRISEFARSV AVAAQ
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