Gene TM1040_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3556 
Symbol 
ID4075477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp600207 
End bp600788 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content61% 
IMG OID638005069 
Productmaf protein 
Protein accessionYP_611787 
Protein GI99078529 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0424] Nucleotide-binding protein implicated in inhibition of septum formation 
TIGRFAM ID[TIGR00172] MAF protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.185618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTTA TTCTTGGCTC AGGCAGCCCG CGGCGGCTGG AACTGCTCGC CCAATTGGGT 
GTAACGCCCG ATGACATCCG CCCCCCCGAC ATTGACGAGA CACCCCAGAA GGGTGAGCTG
CCGCGCGACT ACTGCGCCCG TGTCACCCGC CAGAAAGCCG AGGCCGTCAC ATCGAACCCC
GAAGATCTAG TTCTATGTGC CGACACCACC GTAGTACTGG GGCGGCGCAT TATGGGAAAA
CCACGCGACG CAGGTGAGGC CGCAGAATTT CTGCTGGCGC TCTCCGGCCG TCGCCACCGT
GTCATCACCT CCGTGGCTTT GCGCAAGCAA GATCGCCTCT GGCAAAAGGA CGTGGTGAGC
CAGGTAAAAA TGAAACGCCT CTCTGACGAG GAACTGAACG CCTACCTTGC AACAGGTGAC
TGGGAAGGAA AGGCGGGCGG CTACGCAATC CAAGGCCCCG CTGGCGCGCT GATACCGTGG
ATCAGTGGGT CGTTCACCGC CATCGTCGGC CTGCCACTGG CGGAGACCGC CACATTGCTG
CAAACCGCAG GATACCCGCT TTATAAGGAC ACAGCGTCAT GA
 
Protein sequence
MAFILGSGSP RRLELLAQLG VTPDDIRPPD IDETPQKGEL PRDYCARVTR QKAEAVTSNP 
EDLVLCADTT VVLGRRIMGK PRDAGEAAEF LLALSGRRHR VITSVALRKQ DRLWQKDVVS
QVKMKRLSDE ELNAYLATGD WEGKAGGYAI QGPAGALIPW ISGSFTAIVG LPLAETATLL
QTAGYPLYKD TAS