| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3520 |
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| Symbol | |
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| ID | 4075199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 556410 |
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| End bp | 557264 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005035 |
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| Product | Citryl-CoA lyase |
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| Protein accession | YP_611754 |
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| Protein GI | 99078496 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.897264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCGC GTGCGCGCCC TTATCGTTCC GTCCTTTATA TCCCCGGCTC CAAGCCGCGT
GCGCTGGACA AGGCCCGCAC TCTGCCGGTG GACGCGATCA TCTTTGACCT CGAAGACGCG
GTCTCGGTAG AGGAAAAGGA AAACGCCCGC ACAACATTGG CGGACGCGCT GGCGGCGGGG
GGCTATGGCG CCCGGATGAA GATCGTGCGC ATCAACGGGC TCGACACTGC ATGGGGGCAT
GCGGACGCCG AGGCGGCGGC TCGCATGGGA TGTGACGCGA TCCTTCTGCC GAAGGTGTCT
TCGCCCGCGG ATCTTGATGC GCTGGCAGAG ATCACCGGCG ACGTGCCGCT CTGGGCGATG
ATGGAGACCC CGCGTGGCAT GCTCAACGCC GCAGAAATCG CCGCGCATCC TAGGCTTCAG
GGCATGGTGA TGGGCACCAA TGATCTTGCC AAGGACATGC AGACCCGCTT TCGCGCCGAC
CGGTTGCCGC TGATGAGCGG GCTTGGGTTG TGCGTTCTGG CCGCCAAGGC GGAGGGCAAG
ATCATCGTCG ATGGAGTCTT TAATGCCTTT AAGGATGTGG AAGGGCTGGC GGCGGAATGC
GCGCAGGGGC GCGACATGGG CTTTGACGGC AAGACGCTCA TCCATCCCGC GCAGGTTGAT
GTGACCAATG AGGCCTTTGC ACCTTCTGCC GCCGAGATGG ACCTTGCGCG ACGCCAGATC
GCCGCCTTTG AGGAGGCCGA GGCCAGCGGG CAGGGGGTGG CCGTGGTCGA TGGCAAGATT
GTCGAGAACC TCCATGTGGT CACCGCGCGC GAGATTCTCG CAAAAGCAGA TGCAATTGCA
GCGATCTCCG GCTAG
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| Protein sequence | MDPRARPYRS VLYIPGSKPR ALDKARTLPV DAIIFDLEDA VSVEEKENAR TTLADALAAG
GYGARMKIVR INGLDTAWGH ADAEAAARMG CDAILLPKVS SPADLDALAE ITGDVPLWAM
METPRGMLNA AEIAAHPRLQ GMVMGTNDLA KDMQTRFRAD RLPLMSGLGL CVLAAKAEGK
IIVDGVFNAF KDVEGLAAEC AQGRDMGFDG KTLIHPAQVD VTNEAFAPSA AEMDLARRQI
AAFEEAEASG QGVAVVDGKI VENLHVVTAR EILAKADAIA AISG
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