| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3335 |
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| Symbol | |
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| ID | 4075234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 345607 |
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| End bp | 346299 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004843 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_611569 |
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| Protein GI | 99078311 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.428008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAC GCATTCTTGT TGTCGATGAC GATCCCGACA TTCTCGAGGT GACGCGGTTC
GCCATTGAAA AGGCCGGGTT TGAAACCTGC TTTGCCAGTG ATGGGCTTGC GGCCATTGCC
GCGCAGCGGC GAGACGCGCC CGATCTCGTG GTGCTGGATA TCGGGCTGCC GGAAAAGGAC
GGACTCGAAG TCTGCCGGGA CATCCGAAAA TCCTCAGATG TGCCGATCCT GTTCCTGACG
GCGCGGGATG AAGAGATCGA CCGGATCGTA GGGCTGGAGC TTGGCGCAGA TGATTATTTG
ACCAAGCCCT TTTCACCGCG AGAACTGGTC GCCCGCATCA AGGCCATACT GAAGCGCAGC
ACACCCAGCA TCACCCAACT CCCCACGGCA TTGACACATG GCGCATTGGA GTTGGATGCC
GAGCGCCACC AATGCGCCTT TGCCGGCGTG CCCGTATCTT TGACCGGCTC CGAGTTTCGT
TTGCTGAAAG TCCTGATGAC GCGCCCAGAC CTTGTTCTGA CCAGAGCACA GCTTGTGGAG
GCGCTCTATG GGTTTAATAT CCATGTGTCG GACCGCACCA TCGACAGCCA CATTCGCAAC
ATCCGCGCAA AGATGTCAGA GGTCGGCTGC ACCGAAGCAG TGGTCACCGT ACATGGCGTA
GGCCTCCGGA TGGGCGCATG CCAGCAGACA TGA
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| Protein sequence | MSARILVVDD DPDILEVTRF AIEKAGFETC FASDGLAAIA AQRRDAPDLV VLDIGLPEKD
GLEVCRDIRK SSDVPILFLT ARDEEIDRIV GLELGADDYL TKPFSPRELV ARIKAILKRS
TPSITQLPTA LTHGALELDA ERHQCAFAGV PVSLTGSEFR LLKVLMTRPD LVLTRAQLVE
ALYGFNIHVS DRTIDSHIRN IRAKMSEVGC TEAVVTVHGV GLRMGACQQT
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