Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3313 |
Symbol | |
ID | 4075718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 322245 |
End bp | 323048 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638004821 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_611547 |
Protein GI | 99078289 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0555] ABC-type sulfate transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0319802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCCC GTTCCTTTGG CGTTTTATGC CTCCTTCCTC TGTTGATCTT CACGCTCGCT TTTCTCGCGC TACCCTTGGT GCGCCTTGTG CTGTCCTCCT CCGAGGGCGC AGAGGGCTGG AGCGTTTATG TCAGGATGCT GCAAACCCCG CGGTATCTCT CAGCCCTTCT GCAAACCCTT CTGGTTTCAG GCGCGGTGAC TCTCGCGGCC TTGGCCGTCT CCACCACTGC AGGGCTTTTT CTGACCCGCA ATCGGTTCTG GGGACGCAGT GCCCTCTTGT CGATCCTGAC ACTGCCCCTC GCGTTTCCCG GTGTTGTGGT CGGCTTTATG ATCATCCTTC TCGGGGGTCG GCAGGGGCTG GTAAACCAGA TCACCCCAAG TCACGTGGTC ATTGCCTATT CCACCTTTGG GCTCTTCCTC GGCTATCTCT ATTTCTCCAT CCCACGGGTG CTGCTGACCG TGATGGCCGC GGCCGAGAAG ATAGATCCTG CACTGGAAGA AGCCGCGCGC AGCCTTGGCG CGCCAGCCCA TCGAGTGCTC TGGGATGTAC TCTTGCCAGC GCTGCGCCCA GCCATGGTCG CGGCGGGGGC GATCGCCTTT GCCACCGCCA TGGGGGCCTT TGGTACTGCC TTCACCTTGG CCACGGACAT CGATGTCCTG CCGATGGTGA TCTACACCGA GTTCACGCTA TCGGCGAATT TCGCCATGGC TTCGGCGCTC TCCATCGCAT TGGGCATTGT CACATGGGGA GTCCTCTTGA TTGCGCGCAG CTTTTCCGGC GGCGCGATAG CTGCAGGAGG ATAA
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Protein sequence | MTARSFGVLC LLPLLIFTLA FLALPLVRLV LSSSEGAEGW SVYVRMLQTP RYLSALLQTL LVSGAVTLAA LAVSTTAGLF LTRNRFWGRS ALLSILTLPL AFPGVVVGFM IILLGGRQGL VNQITPSHVV IAYSTFGLFL GYLYFSIPRV LLTVMAAAEK IDPALEEAAR SLGAPAHRVL WDVLLPALRP AMVAAGAIAF ATAMGAFGTA FTLATDIDVL PMVIYTEFTL SANFAMASAL SIALGIVTWG VLLIARSFSG GAIAAGG
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