| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3282 |
|---|
| Symbol | |
|---|
| ID | 4075686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | - |
|---|
| Start bp | 283277 |
|---|
| End bp | 283657 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638004791 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_611518 |
|---|
| Protein GI | 99078260 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.676398 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACT CCCCTGATGC CGAAGTCCAA GACCTCATGA CGCGCTATTT TGAAGGGCTT
TACCACTCCG ACAGTGACGT CTTGCGCACT GTTTTCCACC CTGATCTTGC CTATGTGAAC
GCAACTGAGG GCACCTACGA GCACATGGGG CTCGAAGCCT ATATGGCGCG GATCGATGCG
CGCACGCCGC CTGCCTCCCG TGGTGACGCC CGAGAGGAGG TGATCGAACG GATCACCTTC
AAAGGCGCGC GCATCGGCAT CATCGAGGCG CGGATGACGA TGATGGGCCG CAATTACCAG
GATTTGCTGA CGATCATCCA CAGCGATCAA GGCTGGCGCG TCCTCACCAA AGTCTTCTCA
TTTGTGGAAA GAAGGGATTG A
|
|---|
| Protein sequence | MSNSPDAEVQ DLMTRYFEGL YHSDSDVLRT VFHPDLAYVN ATEGTYEHMG LEAYMARIDA
RTPPASRGDA REEVIERITF KGARIGIIEA RMTMMGRNYQ DLLTIIHSDQ GWRVLTKVFS
FVERRD
|
|---|
| |