| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3265 |
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| Symbol | |
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| ID | 4075407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 266624 |
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| End bp | 267874 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004774 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_611501 |
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| Protein GI | 99078243 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.366543 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTGCG ACCTCTCCAA ACGGCTGCTT GATCTTCAGG ATCGAGATGC GGACATTGCC
CTGTTGCAAC AGGCGCTTGG CTGCGAAAGC GTCACCGGCA ATGAGGCCAA TTTCGCGCCT
TTCCTGATGT CTCAGATGGG GGAGTTGGGG CTGGCACCCA AGCGCGCCGA CTTTCTGCCC
GGTCGGCCAA ATGTCTGGGG GCGCAAACCC GGCTCTGGCG ACGGCCCGAC GCTTATGTTC
GCCGGTCACA CCGATACCGT GCATGTGCGC GGCTGGTCCG AGAAATGGGC GGGCACGGTC
AAGGAAGATC CCTTTGCGGC GCCGCTCATC AACGGGGAGA TCTGGGGGCG AGGCGCTTGT
GACCTGAAAG GCGGCATTTG CGCCTCTCTT GCGGCCATGC GGCTTCTGGA ACGCGCGGGC
GTCACGCTCC GGGGCGATGT GACCTATGCG TTCATCGGCG ACGAAGAAAG CGGCGAATCA
GGCACAGGCG TAAGCGCAGG GGCGGCGGAT CTGGTGACGC GCATCCAATC GGGCGAGATC
ACGACACCTG ATTTTGCCGT CTACGTGGAG CCGACCTGCC TTGATGTCTA CACCGCGCAA
ATCGGGTTCT TCATCGCTGA CGTCAAGATC ACCGGGACAT CTGCCTATTT TGGAACACCG
GAAAAAGGCG TGGATGCGCT CAGGGCTACC CACGCCTTGC TCGCGGCAAT CTGGCGTCAC
CAAGAAGAAT TGGCACTCGG TCCAAAACAC GATCTTGTCG GCACCTCCAA TATTCTTGTC
ACTGAAATCA AAGGCGGCGG ATATATCGCG GTGCCCGGCG AATGTGAGCT GTCGCTAATC
CGCAAACTAC GCCCAGGCGA GGATCTCGAT GCCGCTGTTG CCGCCTTTGA AGCGGTGATT
GACGCGGTAG CCGTAGAGGA GGGGATCAAA ATCCGCATCT CGTATCCGGC TGGTCGCGAT
CATCCCTATG GCGGCTCGCC GGTCGAGATC GCCCCTGATC ATGGCGACGC GCTCAGCCTT
GGACGCTGTA TTCAGGACAC GCACAAGGCC CGCGGCAAGA TTGCCGGCGC GCCCTATTGG
TCGGAGACAC CGTTTTTGGT GAACCAGATC GGCTGCCCCG CCGTCTATTG CGCGCCGGGC
GACATCAGCG TGGCACATAC CTTCGAGGAA CGCATCAACG TCGAGGAGTA TCTCGCCGCG
ATCCGCGCCT ATGCGCTGTT CATGACGCGC TACTGCGGGA CCAATGAATA A
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| Protein sequence | MSCDLSKRLL DLQDRDADIA LLQQALGCES VTGNEANFAP FLMSQMGELG LAPKRADFLP
GRPNVWGRKP GSGDGPTLMF AGHTDTVHVR GWSEKWAGTV KEDPFAAPLI NGEIWGRGAC
DLKGGICASL AAMRLLERAG VTLRGDVTYA FIGDEESGES GTGVSAGAAD LVTRIQSGEI
TTPDFAVYVE PTCLDVYTAQ IGFFIADVKI TGTSAYFGTP EKGVDALRAT HALLAAIWRH
QEELALGPKH DLVGTSNILV TEIKGGGYIA VPGECELSLI RKLRPGEDLD AAVAAFEAVI
DAVAVEEGIK IRISYPAGRD HPYGGSPVEI APDHGDALSL GRCIQDTHKA RGKIAGAPYW
SETPFLVNQI GCPAVYCAPG DISVAHTFEE RINVEEYLAA IRAYALFMTR YCGTNE
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