| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3240 |
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| Symbol | |
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| ID | 4075382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 240577 |
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| End bp | 241494 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004749 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_611476 |
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| Protein GI | 99078218 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGGCA TGGGAGACAT CCCAGTGGTC GTCGCGGTTG CAGAAACGCA AGGGTTCGCC
GCGGCAGCCC GGCGTCTGGG GGTGAGTAAA TCCGCGGTCA GCAAGCGCAT TACTCAGATC
GAGAACCGAT TGGGGGCGCA GCTGTTTCAC CGCTCCACCC GCAATGTCAG CCTCACTGAA
GCCGGAGAAC ACTTCTATTC CCATGCCGTG CGGGCACAAG AGGCGGCGCA AGAAGCCGAA
GACAGCGTGC TGGCGCTGCA AGAAGCACCA AAGGGGCGCC TCAGGGTCAA TGTGCCGATG
GCCTTTGGAC GATTACATGT CGCACCGCTG ATTTCCGGTT TTTTGGCACG CTATCCCGGC
GTGTCGATCG ACATGGTGAT GGATGACCGG ATGGTCGATC TGTTTGCGGA TGGGTTTGAC
CTCGCGCTGC GCGGCGGCAC GCTGGCAGAT TCCGCGCTGG TGGCTCGCAA GATCGCAGCG
TTGCGCAACG TTCTGGTCGC CGCGCCGACG TATCTGGCGC GCCATGGCGC GCCGCAAACG
GTGAGCGATC TGCGCTTCCA CAACTGTCTG CAGTATTCCT TTAGTCGGGA TTTCCAAGAG
TGGGTCTTCG ACTGCGACGG CAAAGCAGAG ACCTTCCGGC CCAGCGGCAG CTACAGCGTG
AACAACGGCG AAGCTCTGCG GGAGGCCGTT CTTGGCGGGA CGGGCATCGG CCGGCTACCG
ACCTTCACCG CCGGTCCAGA TCTCGCCTCG GGGCGACTGG TGCGGGTGCT GCCGCAGTGC
CAGTTGCCGT CGCAGACCCT CTACGCCATC TACCCCGAAC GCCGTTATCT GCCGACCAAA
GTGCGCGTGT TCATCGACTA CCTCCTTGAG CACCTAGGTG GCGAAATCGC GCCTTGGGAC
CAAGCTAAGC TTGGATGA
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| Protein sequence | MEGMGDIPVV VAVAETQGFA AAARRLGVSK SAVSKRITQI ENRLGAQLFH RSTRNVSLTE
AGEHFYSHAV RAQEAAQEAE DSVLALQEAP KGRLRVNVPM AFGRLHVAPL ISGFLARYPG
VSIDMVMDDR MVDLFADGFD LALRGGTLAD SALVARKIAA LRNVLVAAPT YLARHGAPQT
VSDLRFHNCL QYSFSRDFQE WVFDCDGKAE TFRPSGSYSV NNGEALREAV LGGTGIGRLP
TFTAGPDLAS GRLVRVLPQC QLPSQTLYAI YPERRYLPTK VRVFIDYLLE HLGGEIAPWD
QAKLG
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