| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3234 |
|---|
| Symbol | |
|---|
| ID | 4075376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | + |
|---|
| Start bp | 235287 |
|---|
| End bp | 236060 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638004743 |
|---|
| Product | phosphonate ABC transporter ATP-binding |
|---|
| Protein accession | YP_611470 |
|---|
| Protein GI | 99078212 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02315] phosphonate ABC transporter, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGA TCACAAACCT GACCAAGCGC TACGGCAGCG GCGACCCCGT CCTGAAAGAG
CTGAACCTGA CCGTTGAGGG CGAACAGCTG ACCTCCGTGA TCGGCTCTTC GGGCGCTGGC
AAATCCACGC TTTTGCGCTG CATCAACCGT CTCGTAGAGC CGACCTCCGG TTCAGTCGAA
TTGAACGGCA CCGAATTCAC TACCTTGTCC CGCCGCGAGC TGCGCAGCGC GCGCCGCCGC
ATCGGCATGG TGTTTCAGGG CTTCAACCTG ATCGACCGGC TCACGGTGAT GGAGAACGTA
CAGGCCGGGC GGCTTGGGTA CATTTCCACC TGGGCTGCGC TGACCCGCCG CTACCCCAAG
GACGACATTC GCCGGGCCTT CGAACTCATG GAGCGTGTGG GCATCGCCCA TTACGCGGAC
AAACGTGCCG ATGAGCTCTC GGGCGGGGAA CGTCAGCGGG TGGGGGTTGT GCGCGCCCTG
ATGCAACGGC CGGAGATCCT GCTCGCGGAC GAGCCCACAG CGTCGCTCGA TCCCAAGACC
TCTGAGCAGA TCATGTCCCT GCTGCGCGAT CTGGCGCAGG AGCTGAACCT GCCTGTGATC
ATCAACATTC ACAACGTGAC CGAAGCCAAG GAATACTCCG ACCGGATCGT CGGGATGCGC
TATGGACGGA TCATCTTTGA CGACAAACCC GCCGCGCTGA CCCGTGACGA GATGGATACG
ATCTATGCCG GCGTGCCCGC GCAGGACCGC GCCGAAGTGG GAGCCGTTGC ATGA
|
|---|
| Protein sequence | MLKITNLTKR YGSGDPVLKE LNLTVEGEQL TSVIGSSGAG KSTLLRCINR LVEPTSGSVE
LNGTEFTTLS RRELRSARRR IGMVFQGFNL IDRLTVMENV QAGRLGYIST WAALTRRYPK
DDIRRAFELM ERVGIAHYAD KRADELSGGE RQRVGVVRAL MQRPEILLAD EPTASLDPKT
SEQIMSLLRD LAQELNLPVI INIHNVTEAK EYSDRIVGMR YGRIIFDDKP AALTRDEMDT
IYAGVPAQDR AEVGAVA
|
|---|
| |