| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3135 |
|---|
| Symbol | |
|---|
| ID | 4075007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | + |
|---|
| Start bp | 111923 |
|---|
| End bp | 112831 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638004638 |
|---|
| Product | cytochrome-c peroxidase |
|---|
| Protein accession | YP_611371 |
|---|
| Protein GI | 99078113 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGAAA GACCCACCCG GATCGAGTTT CCCACAACAG AACCTTACTC GCCTCAACGC
GCCGCTTTGG GCAAAATGTT GTTTTTTGAT GCACGCCTGT CTGGCGCCAT CAATATGAGT
TGTGCCACCT GTCACAATCC GTCGTTTGGC TGGGAAACAC CGGCATCCCG CGCGATTGGC
GCGATGAATC AGCCCCTGGC GCGCCACACC CCCACAATCG AGAATCTCAC AGAATCAGAG
CATTTCTATT GGGACGGACG CATCGCGTCG CTCAAGGAAC AGATACGCGG CCCGATCACC
CACCCGCTCA AGATGAACTC CAGCATGCGC CAAGTTCAGC GCCGGTTGGA GAATATCTCA
GGTTATCGTC GCTATTTCGA GATCGCCTTT CCAGACACCG GTCTGACGGA GGACACAATC
CTGGTGGCGC TTGCGACCTA TCAGAGAACC CTGCGCTCAG GCTGGTCTCC GTTTGACGAC
TGGGTCGAGG GTGACGAGGA CGCAATTTCT TCTTCCGCGC AGCGTGGCTT TGACGTCTTT
ACCGGGCGCG GCCAATGTGT GAGCTGCCAT CAGGGATGGG CCTTCACCGA TCATGACTTT
CACAATGTCA GCCTCGGAGA CGACGACATC GGGCGCGGCG TGCTGGACCC GACGATGCGG
TACCGCTTCA AGACGCCGGG GCTGCGCAAC ATCGCGCTGC GCGCGCCGTA TATGCACAAT
GGCAGCCTCA ATTCTCTGCG CGCGGTGGTG GAGCATTACC GACGCGGCGG CGCGCCGAAT
ACAACCGCGA GCGACATCGA ACCGCTCACC GAGATGAGTG ACCGCGATGT GAACGACCTC
ATTGCATTCC TTGAAACCCT GACGGCCTAT GCGCCCCATG TTTCGGCTCC GGCCCTGCCT
GTGGACTAA
|
|---|
| Protein sequence | MFERPTRIEF PTTEPYSPQR AALGKMLFFD ARLSGAINMS CATCHNPSFG WETPASRAIG
AMNQPLARHT PTIENLTESE HFYWDGRIAS LKEQIRGPIT HPLKMNSSMR QVQRRLENIS
GYRRYFEIAF PDTGLTEDTI LVALATYQRT LRSGWSPFDD WVEGDEDAIS SSAQRGFDVF
TGRGQCVSCH QGWAFTDHDF HNVSLGDDDI GRGVLDPTMR YRFKTPGLRN IALRAPYMHN
GSLNSLRAVV EHYRRGGAPN TTASDIEPLT EMSDRDVNDL IAFLETLTAY APHVSAPALP
VD
|
|---|
| |