| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3128 |
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| Symbol | |
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| ID | 4075000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 101920 |
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| End bp | 102945 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004631 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_611364 |
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| Protein GI | 99078106 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.77717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCAACG ACTCCAAGCG TCCGCTGACG CTGCGTGATG TTTCAGATGC AACCGGCGTG
TCAGAAATGA CCGTGAGCCG CGTTCTCCGC AATCGCGGTG ATGTCTCTGA AAAGACCCGA
CAAAAGGTGT TGGAGGCGGC AAAGGAACTC GGCTACGTGC CCAACAAGAT CGCTGGCGCC
TTGGCCTCCA AGCGGGTCAA TTTGGTTGCG GTTATCATCC CGTCGCTCTC CAATATGGTC
TTTCCCGAGG TTCTGACCGG TATCAACCGC GTGCTTGAGG ATACCGAGCT TCAGCCGGTT
GTTGGCGTCA CCGACTACCA ACCGGAGAAA GAAGAAAAAG TTCTCTACGA GATGCTCTCG
TGGCGGCCGT CGGGTGTCAT TATCGCCGGT CTCGAACACA CCGAGCCCGC GCGCGCAATG
CTCGCAGCTG CGGGCATTCC TGTGGTGGAG ATCATGGATA CGGACGGCAA TCCGGTGGAT
TCCATGGTCG GGATCTCCCA CCGCCGTGCG GGCCGCGAGA TGGCCAAGGC GATCTTGAAG
GCAGGCTATA GCCATATCGG GTTTATGGGG ACAAAAATGC CCCTCGATCA CCGTGCCCGC
AAACGATTTG AAGGCTTCAC CGAAGCGCTC GCCAAAGAAG GGGTCGAGAT CGAGGATCGT
GAATTTTATT CGGGTGGCTC TGCGCTCGCC AAGGGTCGTG AGATGACCCA AGCCATGCTT
GAGCGCTCTC CCGAACTCGA CTTTCTGTAT TATTCCAATG ACATGATTGG CGCCGGCGGG
CTGCTTCACC TGATTGACCA GGGAATTGAC GTGCCAGGGC AGATTGGTCT TGCGGGCTTT
AACGGAGTGG AGCTTCTGGC GGGCCTGCCG CGGCAGCTGG CGACCATGGA TGCTTGCCGT
CAGGAGATCG GCATGAAGGC GGCACAAATC ATTGCGGCCC AGCTCGAAGA CTCAAACGCA
GAGATCGAGA AACATGTAAC GCTCACACCG ACCATTACCT ATGGCGATAC GCTGAAACGG
CGCTGA
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| Protein sequence | MTNDSKRPLT LRDVSDATGV SEMTVSRVLR NRGDVSEKTR QKVLEAAKEL GYVPNKIAGA
LASKRVNLVA VIIPSLSNMV FPEVLTGINR VLEDTELQPV VGVTDYQPEK EEKVLYEMLS
WRPSGVIIAG LEHTEPARAM LAAAGIPVVE IMDTDGNPVD SMVGISHRRA GREMAKAILK
AGYSHIGFMG TKMPLDHRAR KRFEGFTEAL AKEGVEIEDR EFYSGGSALA KGREMTQAML
ERSPELDFLY YSNDMIGAGG LLHLIDQGID VPGQIGLAGF NGVELLAGLP RQLATMDACR
QEIGMKAAQI IAAQLEDSNA EIEKHVTLTP TITYGDTLKR R
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