| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3101 |
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| Symbol | |
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| ID | 4075548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 70238 |
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| End bp | 71791 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004603 |
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| Product | ATPase |
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| Protein accession | YP_611337 |
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| Protein GI | 99078079 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.422259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGG CTCCTTCCTC AGCGCCCGCG CTGCAATTCT CTGATGATCA GGCGCAAGCC
TTTGATTCCC TTTCCGAACA GCTGCGCAAA GCCGGGGTTG ATCTGGGTGA GGATCTGCTG
CATCCGCCGC GTGGAGAAAC CGGCGTCAGC GCAGTGATCG GCAAGGCCGG ATCGGGCAAG
ACCTTGTTGC TATCGGAGTT CTACAAAGCC CTGGCCGCCG CCGGTGTCGA AGTGGTGTCG
GGTGATTACG AGAGCCGCAA AAAGGGCGAG AAACGCACGC TGGCGATCCT CGCACCAACC
AACAAGGCCG CCAGCGTCCT GCGCCTGCGC GGTGTGCCGG CGACGACCAT TCACCGCATT
CTCTACACGC CGGTGTATGA CCCGGAATAT GAGCGCATCG CCGAGTGGCT GGCGGGAGAG
GGCGACCGGC CCGAGATCGA GGGGCTGAGC GACGAGGCGC TGGCGCGCGC CGAAGCCTTT
TACGCCACCA ATAAATCCAT ACCTGGCGCA CTGGCGGCGG CGGGTTTGCG GGGATCGGAC
TTTATCACCG GCTGGAAACG GCGCGAAGAG CCTCTGGACA TTGGTTTTGT CGATGAGGCC
TCGATGCTGG ACGATCGCCA GTTCGAAGAC CTGAAGGAGA TTTTCCCGAC GCTTGTGCTG
TTTGGGGATC CGGCGCAGTT GGCGCCCGTG AACCAATCGG GTTCGATGGT GTTTGACGAC
CTGCCCGAAG AGCGCAAGCT GATCCTCAAT CGCATTCACC GCCAAGAAGC CGACAACCCG
ATCCTCGATC TGGCGCATGC GCTGGCGGAC CCGCAGATGG GGTTTGAGGA TTTTGAGCGC
ATGGTCGAGG AAAAGGCGCG TCAGGACGAA CGTGTGGTCT GGGGCCAGCG GGTCGAGGTG
GATCTGATGG CGCGCTCGCC GGTTCTGGTC TGGCGCAACA ACACCCGCAT CCGGCTCATC
AACGCGTTTC GGGCCGTGCA TGGCGCGCCA GAGGATCAGC TTCTTGAGGG GGAGCCACTG
ATCTGCGACG GGCTGGAGCT TCCGCTCAAA CACCGCAAGA AGCGGCTCGA TCTGGAAGCG
CGCGGACTCA TCAAGGGGGC GCAGGTCATC TACCTCGGTC CCGGGCGCAA GCCTGGGTTT
TCGCGCCTGC ATGTGATGGG CGCTGAAGAT CCGCAGGTCT CGGCCGCCTC GATCGTGAAG
ATCGAAAAAC CCGAGGAAGA GGAGCCTTTT ATTCCCTTTG CCGCGCGCAT GGGGGCGACG
TTTTTACACG GTGCGGCGGT TACGATCCAC AAGGCGCAAG GCAGCCAATG GGAAACGGCG
CAGGTCTTTG CGCCCGACAT CTATGCGGCA GCGCGGATGG GGCGGGTCGA GGCGGGCCAG
CCCCTGTGGA AACGGCTGGC CTATGTGGCG ATCACCCGCG CACAGGAACG GCTGATCTGG
GTGGTGCGCA ACCGGTTGGC CAAACCTACG GGGCCGCTGC CGGTCGAGGA TCTGAAGCAA
GTGGCGGCGC CCACACTGAC ATTGGAAGCA CAGGACGCGG AGGCCTCTTT ATGA
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| Protein sequence | MTQAPSSAPA LQFSDDQAQA FDSLSEQLRK AGVDLGEDLL HPPRGETGVS AVIGKAGSGK
TLLLSEFYKA LAAAGVEVVS GDYESRKKGE KRTLAILAPT NKAASVLRLR GVPATTIHRI
LYTPVYDPEY ERIAEWLAGE GDRPEIEGLS DEALARAEAF YATNKSIPGA LAAAGLRGSD
FITGWKRREE PLDIGFVDEA SMLDDRQFED LKEIFPTLVL FGDPAQLAPV NQSGSMVFDD
LPEERKLILN RIHRQEADNP ILDLAHALAD PQMGFEDFER MVEEKARQDE RVVWGQRVEV
DLMARSPVLV WRNNTRIRLI NAFRAVHGAP EDQLLEGEPL ICDGLELPLK HRKKRLDLEA
RGLIKGAQVI YLGPGRKPGF SRLHVMGAED PQVSAASIVK IEKPEEEEPF IPFAARMGAT
FLHGAAVTIH KAQGSQWETA QVFAPDIYAA ARMGRVEAGQ PLWKRLAYVA ITRAQERLIW
VVRNRLAKPT GPLPVEDLKQ VAAPTLTLEA QDAEASL
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