| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3096 |
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| Symbol | |
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| ID | 4075543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 65406 |
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| End bp | 66500 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004598 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_611332 |
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| Protein GI | 99078074 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGA TGCCTAAATG GGCCGATGTG GTGCTGATCC CTCTGATCAG CCTCCTGTTG
GCCGCAGTGA TTTCCGCAAT CGTGATCCTC TTGATCGGAG AAAGCCCGAT CGAGGCGCTG
AACCTCATGG TGAATGGCGC GCTGGGATCC ACCTATGGCT GGGGCTACAC GCTCTATTAC
GCCACCAACT TCCTCTTTAC CGGGCTTGCG GTGGCGGTGG CCGCCCATGC GGGGCTCTTC
AACATCGGCG GCGAGGGTCA GGCGATGATT GGCGGACTGG GTCTTGCGCT TGTCTGCCTC
TATATTCCCT TCCCGCATTG GTCGATTGCG CTGATCTTTG CAGCCTTGGG CGCCGGGATC
TTTGGCGCCG CCTGGGCAGC GATCCCCGCC TATCTGCAGG CCAAACGCGG CAGTCACATC
GTGATCACCA CCATCATGTT CAACTTCATC GCTGCGGCGG TGCTCAACTA CATGCTGGTG
AATGCCCTGA AACCCAAGGG CGCGATGGAC CCTTCCACCG CGAAATTCCC AGAAAGCGCT
CAGCTGCCTT CTCTGCACGA GATCCTCGCG CCCATCGGCA TCGAGTTCTC CAAATCCGCT
CCCGCCAATG TCACGCTCTT TGTGGGCATT GCCGCCTGTA TCGTCGTCTG GGGCCTCATC
TGGCATACGC CGCTGGGCCA CGAAATCCGC GCCCTCGGCA AATCCGAGCG CGGCGCCGTC
TATGCGGGCA TCTCGCCGGT GCGCACCGTC ATGATCACCA TGCTGATCTC CGGCGCGCTC
TGCGGCTTGA TGGCCACCAA CAACGTCATG GGCGAGGCTG AGCGCCTGGT GCTGAACGCC
ACCGAAGGCG CTGGCTTTAT CGGTATTGCG GTGGCCCTGA TGGGGCGCAA CCACCCGTTT
GGGGTCTTCC TCGCGGCGAT CCTCTTTGGG TTCCTCTATC AAGGCGGCGC AGAGCTCGCG
CTCTGGACCA ATATCCCCTC CGAGCTGATC GTGGTGATTC AGGCGCTTGT GATCCTCTTT
ACCGGTGCGC TCGACAATAT GGTCCGCATG CCGATTGAAA AGATCTTCCT CGCCTTCCGG
AAGGAGAACG CCTGA
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| Protein sequence | MEKMPKWADV VLIPLISLLL AAVISAIVIL LIGESPIEAL NLMVNGALGS TYGWGYTLYY
ATNFLFTGLA VAVAAHAGLF NIGGEGQAMI GGLGLALVCL YIPFPHWSIA LIFAALGAGI
FGAAWAAIPA YLQAKRGSHI VITTIMFNFI AAAVLNYMLV NALKPKGAMD PSTAKFPESA
QLPSLHEILA PIGIEFSKSA PANVTLFVGI AACIVVWGLI WHTPLGHEIR ALGKSERGAV
YAGISPVRTV MITMLISGAL CGLMATNNVM GEAERLVLNA TEGAGFIGIA VALMGRNHPF
GVFLAAILFG FLYQGGAELA LWTNIPSELI VVIQALVILF TGALDNMVRM PIEKIFLAFR
KENA
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