Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3088 |
Symbol | lipB |
ID | 4075535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 56519 |
End bp | 57196 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638004590 |
Product | lipoyltransferase |
Protein accession | YP_611324 |
Protein GI | 99078066 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTGAAT GGATCACCTC CGACGGTCTG GTCTCATATG AAGAGGCCAC CCGCTTCATG GAAGAGCGCG CCGAGGCCAT TGCCGCAGGC GAGGCAGAAG AGTGCATCTG GCTGCTCGAA CATCCGCCGC TGTACACCGC TGGCACCTCT GCGCGGATCG AAGACCTGAC GGACCCGGAC CGCTTTCCCG TTCATGTGAC CAAACGTGGC GGGCAGTATA CCTACCATGG GCCGGGGCAG CGGGTAATCT ATGTGATGCT CAACGTTGCC GAGCGCGGCA AGGACGTGCG GTGTTTCGTG CGCCAGCTTG AACGCTGGGT GATTCTTGCT CTGGAAGAGT TCAATGTCAC GGGCCACATT CGCGATGGTC GTGTTGGCGT CTGGGTGGAG CGACCGGAAA AGCCCCTCAC GCCCGCCGGT GCCGTGGCCG AGGACAAGAT CGCAGCCATC GGTATCCGGC TGCGCAAATG GGTCAGCTTT CACGGTATTT CTATCAACGT GGAGCCGGAT CTTTCGCATT TTTCGGGCAT CGTTCCCTGC GGGATCAGCG AGCATGGGAC CACCAGCCTC GTCGACCTCG GCCTGCCCGT TACCTTGGCG GATGTGGATG TCGCCCTGCG GCGCACGTTT GATCTGGCCT TCTCAGAAGA AGCCGCACCG AGCTGCGACC TGGACTAA
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Protein sequence | MVEWITSDGL VSYEEATRFM EERAEAIAAG EAEECIWLLE HPPLYTAGTS ARIEDLTDPD RFPVHVTKRG GQYTYHGPGQ RVIYVMLNVA ERGKDVRCFV RQLERWVILA LEEFNVTGHI RDGRVGVWVE RPEKPLTPAG AVAEDKIAAI GIRLRKWVSF HGISINVEPD LSHFSGIVPC GISEHGTTSL VDLGLPVTLA DVDVALRRTF DLAFSEEAAP SCDLD
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