| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3087 |
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| Symbol | |
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| ID | 4075533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 54543 |
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| End bp | 55976 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004588 |
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| Product | hypothetical protein |
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| Protein accession | YP_611323 |
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| Protein GI | 99078065 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACA TCGACATTGT CAGATCCGAC AACGATCCGC GCCAGAGCGA TCACGGCATC
CGCACCGATA CCGCGTCGCG CGGGGTGGAC CTCGAAGGGG CGAAGATCAC CGTCACCTAT
ACCGACGGAA CCACCGAGAC GCTCACCTGG AAAGCGCTTG ATCCCTATAC TGCTGGGGGC
GCGACCGGTG ACAATATCGA CATGTACTTC GGCTATGACT GGCACCAGCT GACCACGACA
AAGCCCCTCG CCTCGCTCAA GATCGATCTG GCCCCGGCAA ACTCCGTGTT CGACACAACC
TTTGCCAGTG ATGGCAACCC GAACGATCCC TCCACTCCAG GCTCCAAAGA AGGCTTTCCC
TTCAAGGTCT CGCCCGACTA CGAGGACCTT GGCGGCACGA TCACCGCGAC CTACTCCGGG
ATCGCGGGGC TCGATGGCAA TGCGCCCGTA GGGGATCTCT ACACCACGAT GACGCTGGAT
TTCACCAGCC TGCCCGGCGG TGGCTTGCAG GGGGATCTGG TCTGGAACTC CGATATCGAC
ACGCTTACCG GTCCCTTTGC CTCTTCTGTG ACCGCGACGG ACGACTTTGT TTCCATCTCC
GGGAATGGCT CGGAAGTGAT TGATATTCTC GGCAATGACG CCGGGGCGGG CAAGGGTCCT
CTGACCATTT CCCATATCGC GGGCACCGCA ATATCGGCCG GAGAGTCGGT GACGCTCGCA
AGCGGTGAGG TGATTACCCT CAATCCCGAC GGAACCTTGT CGATCACCAA CGACAGCCCC
GAGGATGAAA CCAACAGCTT CACCTACACA GTGGTGGATG AGGCAGGAAA TACCGCGACC
GGCACCGTCA CGGTTGACAC CAAACTCACA GCGCCCCCCT GCTTTGTCGC GGGCACGTTG
ATCGACACCG AAGCGGGGCC GATCGCGGTC GAAGATCTCA CCGTCGGCAT GCAGGTGATG
ACGCGGGACC ATGGGCCACA ACCACTGCGC TGGATCGGTC GCAGCACCCG ACTCGCGCGG
GGCCGCAACG CACCAGTGCT GATCGCCCGC AACGCTTTGG GCCACCATGG CCAGATCGCA
CTTTCGCCCA ATCACCGCGT CCTGATCCGA TCAGAGCTCG CAGATCTGCA ATTTGGCCAG
CCCGAGGTGC TCATCAAGGC GAAGCATCTG GTCAATGGAG ACAGCATTCG GATTCTCAGC
GATGGCACGC AGGTGTGCTA TGTGCACATC CTCTTTGACC GCCACGAGAT CGTGCGTGCC
AATGGTCTGG ACAGCGAGAG CTACCACCCC GGCGCTGAAA CCCTTGGTGC TTTTGACGCG
GACACCCGAG CCGAGATTCT CGACCTCATG TCAGACTGGC AAGAGTATGG ACCTGCTGCA
CGGATCACGC TCAAGCCGCG CGAATGTGCG CTGCTTCAAC TAAACCGACA CTAA
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| Protein sequence | MPDIDIVRSD NDPRQSDHGI RTDTASRGVD LEGAKITVTY TDGTTETLTW KALDPYTAGG
ATGDNIDMYF GYDWHQLTTT KPLASLKIDL APANSVFDTT FASDGNPNDP STPGSKEGFP
FKVSPDYEDL GGTITATYSG IAGLDGNAPV GDLYTTMTLD FTSLPGGGLQ GDLVWNSDID
TLTGPFASSV TATDDFVSIS GNGSEVIDIL GNDAGAGKGP LTISHIAGTA ISAGESVTLA
SGEVITLNPD GTLSITNDSP EDETNSFTYT VVDEAGNTAT GTVTVDTKLT APPCFVAGTL
IDTEAGPIAV EDLTVGMQVM TRDHGPQPLR WIGRSTRLAR GRNAPVLIAR NALGHHGQIA
LSPNHRVLIR SELADLQFGQ PEVLIKAKHL VNGDSIRILS DGTQVCYVHI LFDRHEIVRA
NGLDSESYHP GAETLGAFDA DTRAEILDLM SDWQEYGPAA RITLKPRECA LLQLNRH
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