| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3059 |
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| Symbol | |
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| ID | 4075153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 26802 |
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| End bp | 28514 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004560 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_611295 |
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| Protein GI | 99078037 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATC GCGCCCCCGT CTCCGAGTAT CAGTTTCTGC TGCAGCAGAT CCTTGGCTAT
GACCAGATCA CCGCGACCGA GCGTTTTGCC GAGGCGGACG ACGATCTGAT GACCGCGATC
CTCACGGAGG CGGGCAAGAT GAGCGATGAG GTCATGGCGC CCCTGCAGCG TGGTGGCGAT
CTGGAGCCCG CCCGTCTGGA GAACGGCGTG GTGCGGACCT CTCCGGGATA TGGCGACGGT
TACAAGGCGA TTGCAGAGGG CGGCTGGATC GGCATGAGCG CAGATCCCGA GTTTGGAGGC
ATGGGGTTGC CGATGTCACT CACCACTGCG GTCAACGAGA TGATGTCCGG CGCCTGCCTC
AGCCTGCAGC TCGCCCCGCT GATGAGCCAA GGCCAGATCG AGGCGCTGGA GCACCACGCC
TCTGACGCGC TCAAAGAACT CTATCTGCCC AAGCTCATCG CTGGCGAATG GGCGGGGACC
ATGAACCTCA CCGAGCCGCA GGCGGGATCG GACGTTGGCG CCTTGTCTTC AAAGGCCGAA
GACAACGGTG ACGGCACCTA TGCGGTCTCC GGTCAGAAGA TCTATATCTC CTGGGGCGAT
AATGATTTTA CCGAGAATGT CTGCCATCTG GTGCTGGCGC GCCTTCCTGA TGGGGTGCCC
GGCACCAAGG GGATCTCGCT GTTTCTTGTG CCCAAATACC TGCCGGATGA AAATGGCAAC
CCGGGCAAGG CCAACAGCCT CAAGGTGGTG AGCCTCGAGC ATAAGATGGG CCTGCATGGC
TCGCCGACCT GCGTGATGCA ATACGATGGC GCAACCGGCT GGCTTGTCGG CAAGGAGCAC
GGCGGCATGG CGGCGATGTT CACGATGATG AACAACGCCC GTCTCGGCGT GGGCGGTCAG
GGTGTCGGTG TGGCCGAAGG GGCCTATCAG CATGCACTGG CCTATGCACT TGATCGCAAA
CAGGGCAAGA CCCCGGTCGA GGGCGGCACG GGCACCATCG TGGACCACGC CGATGTGCGT
CGGATGCTGA TGGAGATGAA GGCCGATGTC TACGCGGCGC GCGCCATCAT GCTGGCCTGT
GCGGGTGCCA TCGATATGGG GACTGCCACA GGCGACGCCG AGTGGAAGAC CCGGGCGGCC
TTTTTGACGC CCATTGCCAA GGCCTTTGGC ACCGAGACCG GCATCCGGGT TGCTGAACAG
GGCGTTCAGG TCCACGGCGG CATGGGCTTT ATCGAGGAAA CCGGCGCGGC GCAGTTCTAC
CGAGATGTGC GCGTGACTGC GATCTACGAG GGCACCAACG GTATTCAGGC CATGGACCTT
GTGGCGCGCA AGATGATGGA CGGTGGCGAG ATGGCGCATC GCCTGATCGA CGAAATCGAA
GAGCAGGCGG AACGCGCCCG CCCGACCCAT CCGAACATGG CCGAAGCCGT CTGGCAGGCC
TGCGAAACTC TGCGTGAAGC AACCGAATGG CTGGTGGAGG CGAATATGCA GGACCGCTTT
GCCGGGGCGG TGCCGTATCT GATGGCCTTT GCCCGTGTTC TGGGGGGGCA CTATCATCTG
GCGGCCGCAC TCGCCGACAA GGGTGGCGCG CGTGAAAAAC TGGCCCGTTT CTACATCAAG
CGGATGCTGC CGCAGCATGC GGCCTATCTG ATCCACGCCC GCGAAGGCGC GGCGGGGGCC
TTTGCGCTCA CAGCAGAAGA GCTGGCAAGC TGA
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| Protein sequence | MSYRAPVSEY QFLLQQILGY DQITATERFA EADDDLMTAI LTEAGKMSDE VMAPLQRGGD
LEPARLENGV VRTSPGYGDG YKAIAEGGWI GMSADPEFGG MGLPMSLTTA VNEMMSGACL
SLQLAPLMSQ GQIEALEHHA SDALKELYLP KLIAGEWAGT MNLTEPQAGS DVGALSSKAE
DNGDGTYAVS GQKIYISWGD NDFTENVCHL VLARLPDGVP GTKGISLFLV PKYLPDENGN
PGKANSLKVV SLEHKMGLHG SPTCVMQYDG ATGWLVGKEH GGMAAMFTMM NNARLGVGGQ
GVGVAEGAYQ HALAYALDRK QGKTPVEGGT GTIVDHADVR RMLMEMKADV YAARAIMLAC
AGAIDMGTAT GDAEWKTRAA FLTPIAKAFG TETGIRVAEQ GVQVHGGMGF IEETGAAQFY
RDVRVTAIYE GTNGIQAMDL VARKMMDGGE MAHRLIDEIE EQAERARPTH PNMAEAVWQA
CETLREATEW LVEANMQDRF AGAVPYLMAF ARVLGGHYHL AAALADKGGA REKLARFYIK
RMLPQHAAYL IHAREGAAGA FALTAEELAS
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