| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2980 |
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| Symbol | |
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| ID | 4078010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3144135 |
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| End bp | 3145442 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638008309 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_614974 |
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| Protein GI | 99082820 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.104228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.569064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTC GTATCTTCGG CGACTACGCC TATGGGGCAG GTCCTCGCAG CAACTGCTGG
TGGGATGAGA CCTGCCCCCC CCCCATCTGG CCAGAATTTC AAGGCGCACA GAGCGTCGAT
GTGGCGATCA TTGGCGGCGG CTTCACCGGG CTTTCGGCTG CACTGCATCT CGCCGAGGCG
GGGCTGCGCG TTGCCGTACT CGAAGCCGAA ACGCCCGGCT GGGGCGCTTC CGGGCGCAAT
GGCGGATTTT GCTGTCTCGG TGGTGCGAAA CTCGGGCCGC GCGCGATGGC ACGCCTGCAC
GGCAGCCGGG AAACGCAGCT CTATCAGGCG AGCGAAGAAG CCGCGGTCCA CTTGGTTGAA
CAGTTGATCG CCCGCCATGG GATCAGTGCC GACACCCACT CCGACGGTGA AACCGTGATG
GCGCATTCCG CCAAAGCGCG CAAAGCGCTG ATGATGGAGG CCAAGACGTC AGGGGCGACC
TTCATAGATG CCCCGGACTT GGCAGAGCGA GGGTTTGGTG GAAATTTCCA TGGCGCTTTG
ACCACGCCGG TCGGCTTTGC TCTCAATCCT CGCAAGTATC TCTTTGGTCT GGCGCGGGCC
GCGCAGGCCG CTGGGGCCCT ACTTTTTCAA AACAGTCCCG CGCTCGAGGT GACACAACAC
GGCTCGCATT GGCATGCCGT ATGCCCCGGT GGCCGTCTGA GCGCCCCGCA GATGATCATC
GCCACAAATG GCTATTCAAG TGAGAATCTG CCCGAATGGC TAGCGGGCCG CTACATGCCT
ACGCAATCCA CTGTCATGGT GACCCGCCCC ATTACGGCAG AAGAGCAGGC TACTCAGGGC
TGGAACACAG CGCAGATGGC ATATGATACG CGCCATATGC TCCATTATTT CAGGCTGATG
CCTGACGGAC GCTTTCTCTT TGGAATGCGC GGTGGGTTGA TGTCCTCTCC GCGGTCCGAG
GCCAAAATCC GATCACTGCT GCGTCGCCAT TTCGAACGGC TGTTTCCTGC CTGGTCACAT
ATCGAGACGA CTCATAGCTG GTCCGGCATG GTGTGCCTTT CCAGAAATCT TGTACCTTTT
GTCGGCCCTG TCCCAGAACA CAAAGGCCTA TTTGCCGGGC TTTGCTATCA TGGCAATGGC
GTTGCCATGG GCAGCTATTC GGGCGCTTTG TTGGCGCAAC TTGTAGAAGG GCGAACACCC
GAGATGCCCT ATTCAAAGGT GATGCAGCGC ATGCCACGCT TTCCACTGGG GCGCGCGAGA
CGCTTGCTGA TGCCACCGGC CTACGGACTG TTGAGTCTTT TGGACTAG
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| Protein sequence | MMRRIFGDYA YGAGPRSNCW WDETCPPPIW PEFQGAQSVD VAIIGGGFTG LSAALHLAEA
GLRVAVLEAE TPGWGASGRN GGFCCLGGAK LGPRAMARLH GSRETQLYQA SEEAAVHLVE
QLIARHGISA DTHSDGETVM AHSAKARKAL MMEAKTSGAT FIDAPDLAER GFGGNFHGAL
TTPVGFALNP RKYLFGLARA AQAAGALLFQ NSPALEVTQH GSHWHAVCPG GRLSAPQMII
ATNGYSSENL PEWLAGRYMP TQSTVMVTRP ITAEEQATQG WNTAQMAYDT RHMLHYFRLM
PDGRFLFGMR GGLMSSPRSE AKIRSLLRRH FERLFPAWSH IETTHSWSGM VCLSRNLVPF
VGPVPEHKGL FAGLCYHGNG VAMGSYSGAL LAQLVEGRTP EMPYSKVMQR MPRFPLGRAR
RLLMPPAYGL LSLLD
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