| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2967 |
|---|
| Symbol | |
|---|
| ID | 4077118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 3133720 |
|---|
| End bp | 3134007 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 638008296 |
|---|
| Product | transposase IS3/IS911 |
|---|
| Protein accession | YP_614961 |
|---|
| Protein GI | 99082807 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.142788 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGA GCCGTTTTAG CGAAGAGCAG ATCATTGGCA TCCTGAAGGA GCACCAATCC
AGGATAGGCG CCAAGGAGCT TTGCCGGAAG CATGGCATCA GTGATGGCAC GTTCTACAAA
TTGCGCTCAA AGTATGGCGG CATGGAAGTG TCGGAGGCCA ATCGGCTGAA GGCGCTCGAA
GCCGAGAACG CGAAGCTCAA GAAGATGCTG GCGGAACATA TGCTTGACGT TGGCACGCTC
AAGGGGATGC AGGGAATGGA AGCAGGCGAT CGCCATGCGT TCGAGTGA
|
|---|
| Protein sequence | MRKSRFSEEQ IIGILKEHQS RIGAKELCRK HGISDGTFYK LRSKYGGMEV SEANRLKALE
AENAKLKKML AEHMLDVGTL KGMQGMEAGD RHAFE
|
|---|
| |