| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2963 |
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| Symbol | fliE |
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| ID | 4077114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 3131023 |
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| End bp | 3131319 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638008292 |
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| Product | flagellar hook-basal body protein FliE |
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| Protein accession | YP_614957 |
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| Protein GI | 99082803 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1677] Flagellar hook-basal body protein |
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| TIGRFAM ID | [TIGR00205] flagellar hook-basal body complex protein FliE |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.238694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATATTC GTTCGCTTAC CGCCACCTCC GGCTATGCCG CTGCACGTCC GGCAACCAAA
GTTGACCCGG ATTACAATCC GACTTCCCTG CAGGAGCAGG CCAAGACCAG CTTTCAGGAT
TTCACCAATA CACTTGCACA CAGCGAGCAA GTGTCGGTGC AAGCGATGAC AGGCGGCGCA
GATCCGCATC AGCTTGTTCA GGCGCTCGCA CAGACCGAGC TGGCCGTTGA GACCGCGGTA
ACGGTGCGCA ACAAGGTCGT TGAAGCCTAT CAGGAAATCC TGCGGATGCC GGTCTAA
|
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| Protein sequence | MDIRSLTATS GYAAARPATK VDPDYNPTSL QEQAKTSFQD FTNTLAHSEQ VSVQAMTGGA
DPHQLVQALA QTELAVETAV TVRNKVVEAY QEILRMPV
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