Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2844 |
Symbol | |
ID | 4076663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 3012051 |
End bp | 3012731 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638008173 |
Product | nucleotidyl transferase |
Protein accession | YP_614838 |
Protein GI | 99082684 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.55388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCTC CCAATGTCGT TATGATCTTT GCCGCCGGTT TTGGGACCCG CATGGGGGCG CTTACGGCCG ATAAGCCCAA GCCTATGATC GACCTTTGCG GACGCCCGCT GATAGATCAT GCGCTGACAC TGGCACACGC GCTCAATCCC GAACGGGTGG TAATCAACAC GCATTACAAG GCTGAGGTTC TCGAGCGTCA CCTTGAGGGC CGTGATGTGC TCATCAGTCA TGAGGACAAG GAGATTCTCG ACACTGGAGG CGGGCTCAAA CTGGCGCGCG CGCTGCTTGA TGCCTCCGTC AGCTATACGT TGAACCCGGA TGTCGCATGG CGCGGACCAA ACCCGCTCAG CGTGCTCCGC GACGCATGGC GCCCGGCAGA CATGGATGCA CTGTTGCTGT GTGTGCCGAC CGCGCGTGCC GTTGGACGCT TGGGTTCGGG TGATTTTTCA ACAGACTCGC GGGGTTGTAT CCGACGCGGC GGAGATATGG TCTATACCGG TGCACAGATC ATATCGCTCG ACACATTGGA TCGGGTGTCA GAAAGCGCCT TTTCTCTCAA TGCGATATGG GATCAGCTGA TTCCAGAGGG CCGAGCAACC GCCGTGGAAT ATCCGGGCCA CTGGTGTGAC GTTGGCCGCC CTGAAGGGCT CAAGTTGGCT GAAGAAATGA TTGCAGAATA A
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Protein sequence | MTAPNVVMIF AAGFGTRMGA LTADKPKPMI DLCGRPLIDH ALTLAHALNP ERVVINTHYK AEVLERHLEG RDVLISHEDK EILDTGGGLK LARALLDASV SYTLNPDVAW RGPNPLSVLR DAWRPADMDA LLLCVPTARA VGRLGSGDFS TDSRGCIRRG GDMVYTGAQI ISLDTLDRVS ESAFSLNAIW DQLIPEGRAT AVEYPGHWCD VGRPEGLKLA EEMIAE
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