Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2743 |
Symbol | |
ID | 4077615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2887867 |
End bp | 2888775 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638008068 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_614737 |
Protein GI | 99082583 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.418739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATC TCCTTCGTAC CTTTCTGCGC AATCGCAAGG CCGCTATCGG GCTCACCATC GTGCTGATCT ATGTGGCGAT TGCGATTGCC GCGCCCCTGA TCGCACCGTT TGATCCCATT GCCCGCGTGG GCCGTCCGCA TCAGCCGCCC TCGGTCGAAC ACTGGCTCGG GACCACCCGC ATGGGGCGCG ACGTGTTCAG CCAGTTGGTC TGGGGCACGC GTACCTCGCT GATGGTGGGG ATTGTTGCCG GCCTGATCGT GACCGCGATT GGCACCTTCA TCGGCATCAC CGCTGCCTAT TTTGGCGGCC TTGTGGATGA TATCCTCAAC TTCTTTACCA ATGTGGTTCT GGTGCTGCCA CAACTGCCGC TCCTGCTGGT TCTGGCCGCT TTCCTCGGTC AGGTCGGACC CTGGGCGATC GCGCTTATTA TCGGTCTGAC CTCCTGGGCC TGGGGCGCAC GCGTCACCCG TGCACAGGCG ATGTCGCTCA AGACCCGCGA CTTTATTCAG GCCTCCGCGA TGATCGGAGA GCCTACGTGG CGGATGATCC TTGTCGAGAT GCTGCCGAAC CTGCTGTCGA TCATAGGGTT CAACTTTATC GGCTCCGTCA TTTTCACCAT CATCACCGAG GCCACGCTTG AATTCCTCGG CCTTGGCAGC CCCTTGGCCC TGTCGTGGGG CACCATGCTT TATAATGCGC AGACCGCTTC GGCGATCATG GTTGGCGCAT GGTGGGAGGT TCTGGCCCCT TGTGCGGCGA TCGTGCTGAT CGGTGTCGGC CTGTCGCTGA TGAACTTCGG CGTGGACGAG ATCGCAAACC CCCGGATGCG CACCCTTGGC AATGTCGCCA AGGCGCTGCG GATCGAAAAG CGCTTGCTGC GCCAACGCAT GCAGGAGGCC GAGCAATGA
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Protein sequence | MSDLLRTFLR NRKAAIGLTI VLIYVAIAIA APLIAPFDPI ARVGRPHQPP SVEHWLGTTR MGRDVFSQLV WGTRTSLMVG IVAGLIVTAI GTFIGITAAY FGGLVDDILN FFTNVVLVLP QLPLLLVLAA FLGQVGPWAI ALIIGLTSWA WGARVTRAQA MSLKTRDFIQ ASAMIGEPTW RMILVEMLPN LLSIIGFNFI GSVIFTIITE ATLEFLGLGS PLALSWGTML YNAQTASAIM VGAWWEVLAP CAAIVLIGVG LSLMNFGVDE IANPRMRTLG NVAKALRIEK RLLRQRMQEA EQ
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