Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2724 |
Symbol | |
ID | 4077031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2866903 |
End bp | 2868744 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638008049 |
Product | signal transduction histidine kinase |
Protein accession | YP_614718 |
Protein GI | 99082564 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.524296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTCC CGTCTCTCGC CCTCTTGAAG GGCGGGGACG CCCGCACGCA CGAAACCTCG CTCTCTGAAG ATCCGACCGC GCAGAACCGC GCGGCAGGCT GGACACGCAG CCTGTCCCTG CGCCTTGCGG TCATGCTTTC GATTGCCATG GTGCCACTGG GTCTGATCGC GGTTGATCAA ACCGTCCGGC TGCAAAAAGA GGTCAACACC TCCAACAACC TCAGCCTTCA GGCGCTCACT GCGGAATTTG CACAAGAAGA GCGCGAGATC ATTAAATCCG CCTTCGCATC GGCAGAAACC CTGACGCTTT CGGTGCCCGA AATCGCACAT GACCTGTCGC GATGCAGCTC TTTGATGCGG CGCTTCATCT CCACCACCGA TGCGCGCTAC AGCTTTGCAG GGTTCCTGCC CCAGGACGGG GTTATGGCCT GCGCGTCAAG CGGCGGAACA ATCGACTACT CCGAAAACCC CGATTTTCCA GATTGGATGC GCCGTCCAAA GCGCGAAATA CGGGTGAATT CTTATGGGCC CGTGGCTGGC TCTGCGGTGC TGATCATATC CGAACCCGTT TTTGCCAGCA CGGGCGTATT TCTCGGCAAC CAGATCATTC ATGTTCCACA TGATCGCATC GACCAACAGT TCCAGACCAA GCTTGGGGAT CGCCCTCTGG ATCTTGTCAC CGTCAGCGCA GAGGGAGAGA TCCTGAGCGC ATCCGGTGCG CGCGAAACAG CCCTAGAGCG GCTCCCGATT GATCTGACTC TCTCAGAGCT GATCTCGATA CATGACGGCC AGATCGAAGC CAAAAACGCA GCGGGCGAGG TCAGGCTGTT CTCGATTGTT CCGATCCTCA GCGATACCTT TTATGTGATC GGCAGCTGGG ATCCCGAAGG GATCAGCCTG GCGCAAGAGA CCAGCGCGCT GCGCTATCTT TTTTTGACAC CTGCGCTCTT TCCCATCCTG ATGTGGCTCG TCAGCCTGGT GCTGATCTAT GTGGCGCTGG ATCATCAGGT TGTGCGGCAC CTGCGCGTGA TCGGATTGCA GATGCGCCAA TTTGCAAGTT CCCGTGTACT GCCCGATGTG CAGACCAACG GGTTGATGCC GCATGAATTG GAAGTGATCC AGAACCAGTT TACCTATGTG GCCGAAAAAC TGCTTCATGA TGAAGCGCAT CTGTTTGACG CGATGCACGA CAAGGATGTG CTGCTGAAGG AGTTGCACCA CCGGGTCAAA AACAATCTTC AGCTGATCTC TTCCATCATC TCGATGCAGA TGCGCCGCAC GCGCAATCAG GTGACAGCGG CGGCGCTCAA GACCGTGAAC CAGCGTGTCA CAAGCATGGC GACGGTGCAT CAGACGCTCT ATCAGGCATC GGAACTCGGT CAGGTCCAAG CCAACGATCT TCTGCGCGAT GTGGTGCGCC CGCTGACGGA GCTGGCACCT ACCACCGCAC CGGTGCCCAA GATCGACATC ACCTTGGACC CTGTGGTGCT CTATCCGGAT CAGGCGGTTC CTCTGGCGCT CTTGACGGTG GAGGCTGCAA CCAATGCGTT GAAATATCTC GGCGTCGACA AGGCCGGAAA TCGATGGGTC CGCGTGTCTC TGACGACAAT CGAGGACGGA CGGGTCTGCC TGATGATCTC CAATTCCACC AATGATGAGA CCGATTTCGA AGATGAGGGC ACGGGGCTTG GCAGCCAATT GATCCGAGGC TTTGCACGCC AGCTCGAATG CAGCCCCGAG ATCACCGAGG GTGAAGACAG CTACGCCATC AGCGTGACCT TCGACACCTT GCCGTTTGAC TCCGAAGATA CGGGCAAGAC CGGCATTGAG GACGAGGACT GA
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Protein sequence | MNFPSLALLK GGDARTHETS LSEDPTAQNR AAGWTRSLSL RLAVMLSIAM VPLGLIAVDQ TVRLQKEVNT SNNLSLQALT AEFAQEEREI IKSAFASAET LTLSVPEIAH DLSRCSSLMR RFISTTDARY SFAGFLPQDG VMACASSGGT IDYSENPDFP DWMRRPKREI RVNSYGPVAG SAVLIISEPV FASTGVFLGN QIIHVPHDRI DQQFQTKLGD RPLDLVTVSA EGEILSASGA RETALERLPI DLTLSELISI HDGQIEAKNA AGEVRLFSIV PILSDTFYVI GSWDPEGISL AQETSALRYL FLTPALFPIL MWLVSLVLIY VALDHQVVRH LRVIGLQMRQ FASSRVLPDV QTNGLMPHEL EVIQNQFTYV AEKLLHDEAH LFDAMHDKDV LLKELHHRVK NNLQLISSII SMQMRRTRNQ VTAAALKTVN QRVTSMATVH QTLYQASELG QVQANDLLRD VVRPLTELAP TTAPVPKIDI TLDPVVLYPD QAVPLALLTV EAATNALKYL GVDKAGNRWV RVSLTTIEDG RVCLMISNST NDETDFEDEG TGLGSQLIRG FARQLECSPE ITEGEDSYAI SVTFDTLPFD SEDTGKTGIE DED
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