Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2702 |
Symbol | |
ID | 4077009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2844218 |
End bp | 2845183 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638008027 |
Product | ornithine cyclodeaminase |
Protein accession | YP_614696 |
Protein GI | 99082542 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.430916 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACATTG TTCCCGAACG GGTGATTGCC GATCTTATGA CCCGCGAGGC CGCCTTTGAC GCGGTGGAGA AGGTCTTTGC CGCCATGGCC GCCGAGGACG CCTATAACTT TCCCGTAGTG CGCGAGGCCA TCGGCCATGA GGATGCGCTC TATGGGTTCA AGGGCGGTTT TGACCGCGCA GGGCTGACGC TTGGCCTGAA GGCGGGCGGC TATTGGCCCC ACAACCTAGA GAAGCGCGGG CAGATCAACC ATCAGTCCAC CGTGTTCCTC TTCGACCCGG ATACCGGCAA GGCCCACGCG ATGGTGGGCG GCAATCTGTT GACCGCGCTG CGCACGGCGG CGGCCTCCTC GGTGTCGATC AAGCATCTCG CCCGCGACGA TGCAAAGGTG ATCGGCATGA TCGGGGCGGG TCATCAGGCG ACGTTTCAGC TGCGCGCCGC CCTCGAGCAG CGCAACTTCG AAAAGGTGAT CGGCTGGAAC CTGCACCCCG AAATGCTGCC CAACATCGAA GCCGTCGCCG CAGAGGCTGG CCTGCCGTTC GAAGCGGTCG AACTGGACGG GATGCGCGCA GCGGATGTGA TCATCTCGAT CACCTCCTCC TTTGAGGCAA GTCTGATGGC CGATCATGTC AGCCCCGGCA CACATATCGC CTGCATGGGC ACCGACACCA AAGGCAAACA AGAGGTCGAC CCGGCGCTTT TGGTGCGCGC TGAGGTCTTC ACCGACGAGG TGGCGCAATC CGTCGGCATC GGAGAGGCAC AGCATGCGGT GGCGCAGGGG CTGATCGAAG CGGCGGATCT GACGCAGCTC GGGGCGGTCA TAAATGGTGC CCACCCTGGC CGTAGCACTG ACGATCAGAT CACCCTTTTT GACGGCACCG GTGTTGGGCT TCAGGATCTG GCGGTCGCCG CCCGTGTCGT GGAGCTGGCG GTCACGCAGG GCATCGCGAT GGAGGTTGAT TTCTAA
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Protein sequence | MYIVPERVIA DLMTREAAFD AVEKVFAAMA AEDAYNFPVV REAIGHEDAL YGFKGGFDRA GLTLGLKAGG YWPHNLEKRG QINHQSTVFL FDPDTGKAHA MVGGNLLTAL RTAAASSVSI KHLARDDAKV IGMIGAGHQA TFQLRAALEQ RNFEKVIGWN LHPEMLPNIE AVAAEAGLPF EAVELDGMRA ADVIISITSS FEASLMADHV SPGTHIACMG TDTKGKQEVD PALLVRAEVF TDEVAQSVGI GEAQHAVAQG LIEAADLTQL GAVINGAHPG RSTDDQITLF DGTGVGLQDL AVAARVVELA VTQGIAMEVD F
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