Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2698 |
Symbol | |
ID | 4077005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2839728 |
End bp | 2840570 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638008023 |
Product | IclR family transcriptional regulator |
Protein accession | YP_614692 |
Protein GI | 99082538 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.505501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.569064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCGC AAGAAAATGC CTCAAGAGCC ACCAGACGGG CACGGGGCCG TCCGCGCGAC TGGCACGATA AAACCGCGCA GAACACCATC AAATCGCTCG ATCGCGCGAT GGAGGTCTTT GAGTATCTGA GCCAGGCGCA GGGCAAGCCG CTTACTATGA TTGCCGAGGA AATGGGGCAG TCACCCGCCA CCGTTTACCG CATTCTTGTC ACGCTCGAAG GGCGCGGATT GGTGGACTTC GACGCCGAAG AGCAGCTCTG GCACATCGGC GCGCAGGCCT TTGTGATCGG GGCACGGTTC TTGCGCCGCA CCAGTCTCGT GGATCGGGCC CGGCCTATCC TGCGCCGCCT GATGGAGGAC ACCGGCGAGA CTGCGAACCT CGGGGTCGAG AAAGAGGGCC ATGTTCTGTT CCTGAGCCAG GTGGAGACCC ACGCCAGCAT TCGCGCGTTC TTTCCGCCGG GCACCCTGTC ACAGATGCAC GCCTCCGGGA TTGGCAAGGC GCTCCTGGCG GAAATGGACG GCAGCCGTCT CGACCGGCTC CTTGCGGCGA CGCGATTGGA GATATTTACC GACCACACCA TCACCGATCC CGAGGCGCTC AAGGCCGATC TGGCGGCCAT CCGTGCGCAA GGGTTCGCGG TCGACAACGA GGAAAAGAAC GCCGGCATGC GCTGTATCGC GGCGCCGGTG TTCGACATGA ACCGAGAGGC GATCGCGGGG ATCTCGGTCT CTGGTCCGAC CAGTCGCATC AGCGTCGAGA GCATCGCAGA ACTCAGTCGC CCTGTTATCG AAGCAGCGCA GCAATTGACC GTCGCGATTG GTGGCGATCC GGCCGCGCTC TAG
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Protein sequence | MDSQENASRA TRRARGRPRD WHDKTAQNTI KSLDRAMEVF EYLSQAQGKP LTMIAEEMGQ SPATVYRILV TLEGRGLVDF DAEEQLWHIG AQAFVIGARF LRRTSLVDRA RPILRRLMED TGETANLGVE KEGHVLFLSQ VETHASIRAF FPPGTLSQMH ASGIGKALLA EMDGSRLDRL LAATRLEIFT DHTITDPEAL KADLAAIRAQ GFAVDNEEKN AGMRCIAAPV FDMNREAIAG ISVSGPTSRI SVESIAELSR PVIEAAQQLT VAIGGDPAAL
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