Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2558 |
Symbol | era |
ID | 4076689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2701779 |
End bp | 2702684 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638007882 |
Product | GTP-binding protein Era |
Protein accession | YP_614552 |
Protein GI | 99082398 |
COG category | [R] General function prediction only |
COG ID | [COG1159] GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00436] GTP-binding protein Era |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.693757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00166668 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCACAC GCGCAGGCTT TATCGCCCTC ATAGGCGAGC CAAACGCCGG GAAATCCACG CTGCTCAACC GGATGGTCGG CGCCAAAGTC TCGATCGTGA CCCACAAGGT TCAAACCACC CGGGCGCGCA TTCGCGGTGT TGCCATGGAA GGCGACAGCC AGCTTGTTTT TGTCGACACG CCGGGCCTGT TTCAGCCGCG CCGCCGGCTC GACCGTGCGA TGGTGGCAGC AGCCTGGGGC GGGGCTGCGG ATGCAGATGT GATCGTGATG CTCATCGAAG CCCACCGCGG CGTGACCGAG GGCGTCGAGC GCATCCTGGA AAACCTTGGA GAGGTAGCCG AGGGACGGCG CGTGGCGCTG GCGATCAACA AGATCGACAA GGTGCAATCC GATGTGCTGC TCGGTCTGAC CAAGGATCTC AACGACCGCT TCCCCTTCGC AGAGACCTTC ATGATCTCGG CCGAAAAAGG CTATGGGACC GAGGATCTGC GGCAGTGGCT TGCTGCCGAA GTGCCGGAAG GCCCGTGGCT CTATCCCGAA GACCAGATCG CCGATCTGCC GCTGCGCATG ATCGCTGCCG AAATGACCCG CGAAAAGCTC ACCCTGCGTC TCCACCAGGA ACTGCCCTAC CAGCTCACGG TGGAGACCGA GAAATGGGAA GAGCGCAAGG ATGGCTCCGC ACGCATTGAC CAGGTGGTCT ATGTGGTGCG CGATGGCCAC AAGGGCATCG TGCTCGGCAA ACGTGGCGAG ACCATCAAGG CTGTTGGTCA GGCGGCACGC GCCGAGCTTG AGGAATTCCT GGATCGCAAG ATCCATCTTT TCCTGCAGGT TAAGGTGCGC CCCAACTGGC TTGAAGAATC CGAGCGGTAC TCGGAAATGG GCCTTGAGTT CAAAGACGGC AACTAA
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Protein sequence | MTTRAGFIAL IGEPNAGKST LLNRMVGAKV SIVTHKVQTT RARIRGVAME GDSQLVFVDT PGLFQPRRRL DRAMVAAAWG GAADADVIVM LIEAHRGVTE GVERILENLG EVAEGRRVAL AINKIDKVQS DVLLGLTKDL NDRFPFAETF MISAEKGYGT EDLRQWLAAE VPEGPWLYPE DQIADLPLRM IAAEMTREKL TLRLHQELPY QLTVETEKWE ERKDGSARID QVVYVVRDGH KGIVLGKRGE TIKAVGQAAR AELEEFLDRK IHLFLQVKVR PNWLEESERY SEMGLEFKDG N
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