| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2502 |
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| Symbol | |
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| ID | 4076504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2644053 |
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| End bp | 2645501 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638007826 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_614496 |
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| Protein GI | 99082342 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.207618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGATGC CACCCCCCAA TGCCGCCATC CTGTCCTTGA AGGCAGAGCT TTTGCAGCGC
CTGCAACAGG TGTTGCCAAA GGATGCGCTG ATTTCGGATG AAGCAGAGAC ACGCGCGTAT
GAGTGTGACG CGCTGACGGC CTATAAATGT CCGCCGATGC TGGCGGTTCT GCCGCGCTCT
ACTCAGGAAG TGTCAGACGT TCTGCGGATA TGTCACCAGA TGAATGTACC CGTTGTACCG
CGTGGAGCTG GAACATCGCT GGCGGGGGGC GCATTGCCTA CCGCAGACTG CGTAATCCTC
GGGGTGGCGC GGATGAACGA GGTGCTGGAG ACGGACTACG ACAATCGTGT CATCCGTGTT
CAGACCGGGC GCACCAACCT GTCGGTGTCC GGCGCCGTGG AAGAAGAGGA TTTCTTTTAT
GCGCCTGACC CCTCTTCACA GCTCGCCTGT GCGATTGCTG GCAACATCGC AATGAATTCC
GGTGGGGCGC ATTGTCTCAA ATACGGGGTG ACGACCAACA ACCTTCTTGG GGTCACCATG
GTGATGATGG ACGGAACGGT TGTCGAAATA GGTGGCGCGC ATCTGGATGC CGGTGGGCTT
GATCTCCTCG GGGTGATCTG CGGCAGTGAG GGGCAGCTGG GCGTGGTGAC CGAAGCCACC
CTCCGGATTT TGCGCAAACC CGAAGGGGCG CGGCCCGTGC TTGTGGCCTT TGACAGCAAT
GAAGTCGCTG GGGCCTGTGT TTCTGATATC ATCAAAGCGG GCGTTCTGCC GGTGGCGATT
GAGTTCATGG ACCGTCCTTG CATTGAAGCC TGCGAAGCGT TTGCCAAAGC GGGCTATCCG
ATGTGCGAAG CTTTGCTGAT CATCGAAGTC GAAGGGTCAG AAGCAGAAAT CGACCATCAG
CTGAAGCTCA TCACCGAGAT CGCGCGGCGC CACAACCCGG TGGAGTTGCG CGAAGCGGGG
GATTCCGAGG AAGCCGCGCG CATCTGGCTT GGACGCAAAT CCGCGTTTGG TGCGATGGGA
CAGATCAACG ACTACATGTG TCTTGATGGG ACGATTCCCG TTTCTGCCCT GCCGCAGGTT
CTGCGTCGCA TCGGGGAGAT GAGCGCGGAG TTCGGCCTGA AAGTGGCAAA CGTGTTTCAC
GCAGGGGATG GCAACATGCA CCCGCTGATC CTGTTTGATG CCAACAAACC CGGTGATCTG
GAGCTGTGCG AAGCCTTCGG GGCCGAGATC CTGAAGCTCT GTGTCGAGGT CGGGGGGTGT
CTGACCGGCG AACACGGCGT TGGGATCGAA AAGCGAGATC TGATGCTGCA TCAATATGCA
CTTGCTGACA TCGAAGCCCA GTTGCGCGTG AAGGATGTGT TTGACCCGAA GTGGCTGTTG
AACCCGGCAA AGGTCTTTCC GCTGTCAACC ACGCAGAGCC GGCGCAACGT CGCGATTGCG
GCGCAGTAG
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| Protein sequence | MEMPPPNAAI LSLKAELLQR LQQVLPKDAL ISDEAETRAY ECDALTAYKC PPMLAVLPRS
TQEVSDVLRI CHQMNVPVVP RGAGTSLAGG ALPTADCVIL GVARMNEVLE TDYDNRVIRV
QTGRTNLSVS GAVEEEDFFY APDPSSQLAC AIAGNIAMNS GGAHCLKYGV TTNNLLGVTM
VMMDGTVVEI GGAHLDAGGL DLLGVICGSE GQLGVVTEAT LRILRKPEGA RPVLVAFDSN
EVAGACVSDI IKAGVLPVAI EFMDRPCIEA CEAFAKAGYP MCEALLIIEV EGSEAEIDHQ
LKLITEIARR HNPVELREAG DSEEAARIWL GRKSAFGAMG QINDYMCLDG TIPVSALPQV
LRRIGEMSAE FGLKVANVFH AGDGNMHPLI LFDANKPGDL ELCEAFGAEI LKLCVEVGGC
LTGEHGVGIE KRDLMLHQYA LADIEAQLRV KDVFDPKWLL NPAKVFPLST TQSRRNVAIA
AQ
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