Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2489 |
Symbol | |
ID | 4076854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2629773 |
End bp | 2630507 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638007813 |
Product | hypothetical protein |
Protein accession | YP_614483 |
Protein GI | 99082329 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.525072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TGATCGCGGC GCTTGGCCTT GCCACCGTGT CATGGATCCC CACGGCCCAT TCAGCCGAGA CTTTGGTCGT CGGCGTTGAA AACATCGAGT ACCTCCCACA TTACTATTGG GACGGAGATA GCTATTCTGG GTTTGGGGCT GATGTGCTCA ATCGTTTTGC CGAGGACGAG GGCTATACGC TCACCTATCG CGCGCTGCCG ATCTCCAGGC TTATGCAGGC GATGGTCAAC GGGGACGTCG ATCTGAAGTA TCCCGACAAC GCGTTCTGGT CTGCCGACCT CAAGGAAGGC AAGAGCATCA CCTATTCTGC ACCAGTGGTT GAAGCGATCG ACGGTGTTAT GGTTCTACCC GAAAATCTAG GTCAGCCCGT GGAGTCGATC GAACGCTTGG GCACCGTCTT GGGCTTTACT GCGTTTGCTT GGATGGACCG AATTCAGAGT GGTGCAGTCG CGCTAACTGA AAATTCCAGC TTCTCTGGCA TGGTGCGCCA GGCGCTTGCT GGACGGATTG ATGGTGCATA TGCCAATCAG GACGTAGTGC GCCGCGTTCT GACTGATATT GGCATGGAGG CCGAAGCCCT CGTGTTCGAC GAAGGGTTGC CGCACTCGGT TTCAAACTAC CATCTTTCGT CCGCTACACA TTCAGAGGTG GTGGAAAAAT TCGATGCCTG GATGGCAGCC AACCCTGATG TGATCGCCGA GTTGAAGTCC AAGCACGGGT TGTGA
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Protein sequence | MKKLIAALGL ATVSWIPTAH SAETLVVGVE NIEYLPHYYW DGDSYSGFGA DVLNRFAEDE GYTLTYRALP ISRLMQAMVN GDVDLKYPDN AFWSADLKEG KSITYSAPVV EAIDGVMVLP ENLGQPVESI ERLGTVLGFT AFAWMDRIQS GAVALTENSS FSGMVRQALA GRIDGAYANQ DVVRRVLTDI GMEAEALVFD EGLPHSVSNY HLSSATHSEV VEKFDAWMAA NPDVIAELKS KHGL
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