| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2417 |
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| Symbol | |
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| ID | 4076743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 2558405 |
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| End bp | 2559481 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638007739 |
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| Product | ABC transporter related |
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| Protein accession | YP_614411 |
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| Protein GI | 99082257 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0208356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.753894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCG AACTCAGATC CGTGACCAAA CGCGTGGGCG GTGATCTCCA TATCAAGGAG
ACCTCCCTGA CGCTCGAGCC CGGTCACTTC AACGTCCTTC TGGGCGCCAC CGGGTCGGGA
AAGACCTCTC TTATCAAGAT GATGGCCGGG CTTGACCCGA TTGCCTCCGG CTCTGTCCTC
ATGGACGGGC AGGACGTGAC CCGCCTCAAC ACACAAAAGC GCAACATCAG CCTTGTGCAT
CAGTTTTTCA TCAACTACCC GCACATGACG GTCTACGACA ATATCGCCTC GCCACTCAAA
GTTGCGGGCA TGGCAAAGTC GGAACTTGAT GACCGCGTGC AGGAAGCGGC GAAAATTCTG
CAGCTCACCC CAATGTTGCA TCGCCGCCCG CACGAGCTCT CTGGCGGTCA GCAGCAGCGG
ACCGCGCTGG CGCGTGCGAT TGCAAAGGAA AGCCGCGCTG TCTTCCTCGA CGAGCCGCTG
GCGAACCTCG ACTATAAGCT GCGCGAGGAA TTGCGCGATC AGCTGCCGGA GCTCTTTGCC
GGTCGTGGCG CGGTTGTGGT CTATGCCACC TCTGAGCCCG AAGAGGCGCT CCTTCTTGGC
GGCAAGACAG CACTCATGCG CGATGGCCGC GTGACCCAAT TCGGCCCCAC CGCAGAGATC
TATCGCAATC CTGAAAACGT CGAAGCCGCA CGCGTGTTCT CCGACCCGCC GATCAACACG
GCGACAATCA CCAAACAAGG CTTTGAGGCG CGTTTGGGGC CGGATGTGCG CTGGACCCTG
GATGGCGCGG CTGCCAGCCT GAAGGACGGC ACCTACACCA TCGCAATCCG CCCGCATCAT
GTCACCCCGG TGGCATCCTC GGCAGGACTG GTAAGACTCA ACGGTCGCGT GCAGGTGACA
GAGCTATCCG GTTCCGAAAG CTCGGCGCAT TTCGATCTTG CGGCCTCCGG GCAGGAAACC
TCCTGGGTGT CCCTGAGCCA CGGCGTCCAC CCCTACGAGG TTGGCGAATT GCATGATTTC
TATATGGACC CGCGGGCGGC ATATGTCTTT GCCCCTGACG GCTCCCGCGT GGCGTGA
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| Protein sequence | MALELRSVTK RVGGDLHIKE TSLTLEPGHF NVLLGATGSG KTSLIKMMAG LDPIASGSVL
MDGQDVTRLN TQKRNISLVH QFFINYPHMT VYDNIASPLK VAGMAKSELD DRVQEAAKIL
QLTPMLHRRP HELSGGQQQR TALARAIAKE SRAVFLDEPL ANLDYKLREE LRDQLPELFA
GRGAVVVYAT SEPEEALLLG GKTALMRDGR VTQFGPTAEI YRNPENVEAA RVFSDPPINT
ATITKQGFEA RLGPDVRWTL DGAAASLKDG TYTIAIRPHH VTPVASSAGL VRLNGRVQVT
ELSGSESSAH FDLAASGQET SWVSLSHGVH PYEVGELHDF YMDPRAAYVF APDGSRVA
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