Gene TM1040_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2415 
Symbol 
ID4076741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2555077 
End bp2556198 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content62% 
IMG OID638007737 
Productputative RNA methylase 
Protein accessionYP_614409 
Protein GI99082255 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0460836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCTG ACACCTCCTT TGAAATCTTT CTCGTGGCTC CTCCGGGGCT GGAACATGTC 
CTGTGTGAAG AGGCCCGCGA GGCCGGGTTT GAAGCGGCGC GCCAAGTTGC TGGGGGTGTG
AGCTTTGAAG GCACTTGGGA GGACGTGCGA CGCGCCAATC TGGTGCTGCG TGGTGCGACG
CGTGTTCTGG CGCGGATCGG TTCTTTTCGC GCCTTCCACC TTGCCCAGCT GGATAAGCGC
GCGCGAAAAT TCCCGTGGGG GGATGTTCTG CGCAAGGACG TACCGGTCAA GGTTGAGGTG
GTCACCAACA AGAAGTCCAA GATCTATCAT GCGGGTGCGG CCACACAGCG GATCGAGACC
GCCATCACCG AGGAACTCGG TGCGCCAATC GCCCCTGATG CGCCGGTGAC GCTCAAGGTT
CGGATTGACG ACAACACCTG TATTTTCAGT GTCGATACCT CTGGCGAGGG CCTGCATAAA
CGCGGCCACA AGGTCGCTGT TGGCAAGGCC CCGATGCGCG AAACCCTCGC GGCGCTGCTG
TTGCGCGCCT GCGGCTATGA CGGGAGCGAA CCTGTCGTGG ACCCGATGTG CGGGTCGGGG
ACATTTGTGA TCGAGGCGGC AGAAATCGCG TCCGGCCTCA CTGCGGGGCG CAGCCGGTCG
TTTGCCTTTG AGCAGCTAGC AAATCACGAC GCGACCGCTT GGACTGATCT CAAGGCAAGC
ATGCCAGAGG CGGTTCCCAC CGTGTGTCGG TATTTTGGTT CGGATCGAAA TACGGGTGCC
ATCGAGATGG CTAGTCAGAA CGCCGACCGC GCTGGCGTGG AGGGGATTTG CCACTTTACC
CATGCCGCCG TCAGTGACCT GCAACGTCCA GAAGGTCCGG CGGGGCTCGT GATGGTCAAT
CCCCCCTATG GGGCAAGGAT TGGCAACAAA AAACAGCTGT TTGCGGTCTA TGGCGCCATG
GGCGAGGTGT TGAAAACGCG GTTTTCCGGG TGGCGCGTCG GGATCGTCAC CAGCGATACC
GCCCTTGCGC GCGCCACCGG CTTGCCATTC TTGCCCGTTG GCGCGCCAAT TGCGCACGGC
GGCTTGAAGG TGCGCCTGTT TCAGACCGCC CCTCTCCCCT AA
 
Protein sequence
MMADTSFEIF LVAPPGLEHV LCEEAREAGF EAARQVAGGV SFEGTWEDVR RANLVLRGAT 
RVLARIGSFR AFHLAQLDKR ARKFPWGDVL RKDVPVKVEV VTNKKSKIYH AGAATQRIET
AITEELGAPI APDAPVTLKV RIDDNTCIFS VDTSGEGLHK RGHKVAVGKA PMRETLAALL
LRACGYDGSE PVVDPMCGSG TFVIEAAEIA SGLTAGRSRS FAFEQLANHD ATAWTDLKAS
MPEAVPTVCR YFGSDRNTGA IEMASQNADR AGVEGICHFT HAAVSDLQRP EGPAGLVMVN
PPYGARIGNK KQLFAVYGAM GEVLKTRFSG WRVGIVTSDT ALARATGLPF LPVGAPIAHG
GLKVRLFQTA PLP