Gene TM1040_2320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_2320 
Symbol 
ID4078310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2440401 
End bp2441042 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID638007642 
Productchloramphenicol O-acetyltransferase 
Protein accessionYP_614314 
Protein GI99082160 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC CAGACCCCAG ACTGCGCCAT CCGATTGTGC TGCCGGACGG GACTCCGCAT 
GCCGGGACCG TGCTGTTGGC GCGTGTGGTG GAGAACCCGA ATTTCATTGT CGGGGACTAC
ACCTATGCAT CGGATTTCGA GCCACCACGC GACTGGGGCA GCCACCTCGC ACCCTATCTG
TTTGCGGGCG CGCGCGAGCA GCTCAAGATC GGTCGGTTTT GTCAAATCGC GCATGGGGTG
AAGTTCATCA CCGCCTCTGC CAACCACGCG CAAGAGGGCC TCAGCTGCTA TCCGTTTCCG
GTGTTTGATC CCGCGCAGAT GGCCGGGTTT CAACCCGACA CCCGCGACAC GGTGATCGGC
AATGATGTCT GGATCGGCTA CGGCACGCTG ATCCTGCCCG GCGCGCGCAT CGGCGACGGC
GCCATCATCG GCGCGGGTGC CGTGGTGCGC GGCACCGTGC CGCCCTATGC GATCATGACC
GGCAATCCTG CCAGCATCGC CCGCCACCGT TTCTCCAAAC CTCAGATCGC CCGGCTTCTG
GCGCTGAAAT GGTGGGACTG GCCCGCTGAT CTGATCCTGC GCGCCGAGCC TGCGATCACC
TCGGGCGATC TTGACATGCT CGAAGCGCTC GCCCCCGACT GA
 
Protein sequence
MPLPDPRLRH PIVLPDGTPH AGTVLLARVV ENPNFIVGDY TYASDFEPPR DWGSHLAPYL 
FAGAREQLKI GRFCQIAHGV KFITASANHA QEGLSCYPFP VFDPAQMAGF QPDTRDTVIG
NDVWIGYGTL ILPGARIGDG AIIGAGAVVR GTVPPYAIMT GNPASIARHR FSKPQIARLL
ALKWWDWPAD LILRAEPAIT SGDLDMLEAL APD