Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2320 |
Symbol | |
ID | 4078310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2440401 |
End bp | 2441042 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638007642 |
Product | chloramphenicol O-acetyltransferase |
Protein accession | YP_614314 |
Protein GI | 99082160 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGC CAGACCCCAG ACTGCGCCAT CCGATTGTGC TGCCGGACGG GACTCCGCAT GCCGGGACCG TGCTGTTGGC GCGTGTGGTG GAGAACCCGA ATTTCATTGT CGGGGACTAC ACCTATGCAT CGGATTTCGA GCCACCACGC GACTGGGGCA GCCACCTCGC ACCCTATCTG TTTGCGGGCG CGCGCGAGCA GCTCAAGATC GGTCGGTTTT GTCAAATCGC GCATGGGGTG AAGTTCATCA CCGCCTCTGC CAACCACGCG CAAGAGGGCC TCAGCTGCTA TCCGTTTCCG GTGTTTGATC CCGCGCAGAT GGCCGGGTTT CAACCCGACA CCCGCGACAC GGTGATCGGC AATGATGTCT GGATCGGCTA CGGCACGCTG ATCCTGCCCG GCGCGCGCAT CGGCGACGGC GCCATCATCG GCGCGGGTGC CGTGGTGCGC GGCACCGTGC CGCCCTATGC GATCATGACC GGCAATCCTG CCAGCATCGC CCGCCACCGT TTCTCCAAAC CTCAGATCGC CCGGCTTCTG GCGCTGAAAT GGTGGGACTG GCCCGCTGAT CTGATCCTGC GCGCCGAGCC TGCGATCACC TCGGGCGATC TTGACATGCT CGAAGCGCTC GCCCCCGACT GA
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Protein sequence | MPLPDPRLRH PIVLPDGTPH AGTVLLARVV ENPNFIVGDY TYASDFEPPR DWGSHLAPYL FAGAREQLKI GRFCQIAHGV KFITASANHA QEGLSCYPFP VFDPAQMAGF QPDTRDTVIG NDVWIGYGTL ILPGARIGDG AIIGAGAVVR GTVPPYAIMT GNPASIARHR FSKPQIARLL ALKWWDWPAD LILRAEPAIT SGDLDMLEAL APD
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