Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2127 |
Symbol | |
ID | 4076441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2232999 |
End bp | 2233481 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638007447 |
Product | NusB antitermination factor |
Protein accession | YP_614121 |
Protein GI | 99081967 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCA AAGACGCCCC GAAACCGGGA AAGAACAAGA CGCAGGCGCG CTCTGCCGCG CGTCTTTATG CGGTGCAGGC GCTGTTTCAG ATGGAGCAGA GCGATCAGAG CACCAACAAG GTGATCGTGG AATTCGAAGA CCATCGCTTT GGCGCGACCT ATGAGGGTGA CGAATATGCC GAAGGCGATA CCAAGCTGTT TCGCCAGCTG GTCAATGATG CGGTGAACCA TCAGGCCAAG ATCGACCAGA TGACCGACCG TGCCCTTGTG GCGAAATGGC CGATCGCGCG GATCGACCCA ACCCTGCGGG CGTTGTTTCG CGCTGCCGGA GCGGAATTTG TCGAGAGTGA TACGCCGGTC AAAGTGGTGA TCAACGAATA CGTTGATATT GCGCGCGCCT TCTTCCCGGA AGGGCGCGAG GCGAGCTTTG TCAATGCGGT GCTGGATCAC ATGGCACGTG AGGCAAAGCC CGAAGCCTTC TGA
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Protein sequence | MTSKDAPKPG KNKTQARSAA RLYAVQALFQ MEQSDQSTNK VIVEFEDHRF GATYEGDEYA EGDTKLFRQL VNDAVNHQAK IDQMTDRALV AKWPIARIDP TLRALFRAAG AEFVESDTPV KVVINEYVDI ARAFFPEGRE ASFVNAVLDH MAREAKPEAF
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