Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_2095 |
Symbol | |
ID | 4077846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 2199768 |
End bp | 2202122 |
Gene Length | 2355 bp |
Protein Length | 784 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007414 |
Product | hypothetical protein |
Protein accession | YP_614089 |
Protein GI | 99081935 |
COG category | [N] Cell motility |
COG ID | [COG1360] Flagellar motor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTCA AGCGGCGCAC TGGTCAACGG TTTCAAGGCT CGATCTGGCC CGGTTTCGTG GATGCGATGA CCGGACTTTT GCTGGTTTTG ATGTTTGTTC TCACCATTTT TATGGTGGTG CAATTTGTGC TGCGCGAGAC GATCTCGGGC CAGGAATCCG AGCTTGATGA ACTCTCGACC GAGGTGCGGG CGCTGGCAGA GGCACTTGGC GTCAAGGAAC GCGAGGCCAG CCAGTTGCAG GCCCGACTGG GCGCGCTGGG GGCGACGCTG TCCTCAACGC GCTCTGATCT TGATGCCGCG CGAGAGCAAA TTTCGAACCA GACCGCGCGG ATCAGCGCCC TGACGCAGGA ACGTGATGCC GCGAGATCGG ATCTTGCAAC GGCCCGCACG CAGATTTCCG ACTTTGAGGC GCAGGTGGCG GCTCTGATCG CTGGTCGTGA AAGTGCCGAG GCGCAGATTG CCGATCTCAC CGCCGAGCGG GACGCGCTTG ATGCGGCACG CAGCGAGTTG CTCTCAGAAC AGGAGGCGCT GAACCTTGCA TTGGCCCAAC TGCGCGAAGA GGTGGACGCG GAGGCCGAAG CCGCCCGTCT TGCCGCCGCT CAGACCGAGG CCCTGCAGGC GCTGGTGGAG GATCTGCGCG CAGAAGGGGC GGCACAGTCT GAACGCGTGA GTGCGCTCGA AGAGGCGCTC TCTGAAGAAG AGGCGACCCG GCTGGCTGAG GCCGCTGCGG CAGAGGCCCT GCGCGCGCGG TTGGAAAACG CGGATGCCGA ACTCACTGCA ATGACCCTTG CACTGGAAGA AGAGCGCAAG AAGGCCGAGG ACACGCTGAC GCTTCTGGCG GCTGCGGAGG CGGCGCGCGA CCAGCTTGAT ACGGAGCTTG AAGAGGCCTT GGCCGCGATT GAGCAAGCTA AGGCGCAGGT CAATGATCGC GACGAGTTGG CAGAGCGCCT GACCCGCGTT CTGGCCCAGA TGGAAGTCAC TGAAAGCACG GCAACGGCGC GAGTCTCGGC GCTTGAAGCG GAGCTGGAAC GCGTCAGAAA CGAGAATGCT GCAACCCGCG AGCGTATGAC TGCAGACTTG GAGACGGCGC GCCAGGAGGC CGCAGATACG CGCAGCCGCC TTGAGGCGGA GCTGACCCGA CAGCGGGCGC AGACGGTGGA AACCGAGAGC CAATATCAGG CCCAACTGCG CGCCGCCCAA GAGAGTTTTG ACGCCGAGCG CCGCGCGTTG GAAGATCGCC TTGCGACCCT CGAGGCACAG GCCGATACCA CGCGGCGTGA CCTGGAAGAC CAGCTTGCCG CGCTGCGTGG TCAGGCAGAA GAAACCCGCA GTGGGCTTGA AACGCGTTTG GCGCGTGCCG AGGCCGATCT GGCTGCAGCC CGCGCGGCTG CGAGTTCCAC CGCAGAGGAA CGCGCTTCGG TTGAACAGCG TTTGCTCATC GCGCTTGAGG CGCTGGAACG GGCGCAGGCT GCGGCAAGCG ATCAGGAGGT TCTGCAGAGC CGTCTTCTGG CCGCCTTGGC GCAAAAAGAT GATTTTGCAC AGGAGATTTC CGAACAGCGC ACCCTCGCAG AACAGCGCGC GGATCTCTTG GCGCAGGCCC GCGCTGCACT TGCGGAGGAA AAACAGATCT CGGAAGACGC CCGCCGCGAG ACGGCCTTGC TCAATCAGCA GGTGGCGGCG CTGCGTGAAC AGCTTGGTGG GCTGCAGTCG CTCCTGGACG ATTTCAAAGA ACGGGACGCA GCACAGGGAA TTCAGCTCCA GAGCCTGGGT CAGGATCTCA ATACAGCGCT TGCGCGTGCC GCCGCTGAAG AGCGCCGCCG CCGCATGCTC GAAGAACAGG AGCGCAAACG TCTTGAGGCA GAGCGCGAAC GTCTCGCCAA TGAAGCCAAG GATCTGGAGC AATATCGCTC CGAGTTCTTT GGTCAGTTGC GCAGCGTCCT GGGCAATCAG GAAGGTGTAC GCATCGAAGG CGACCGTTTT GTCTTTGCCT CCGAGGTGCT GTTTGCACTG GGAAGCGCCG AGCTCTCAGA GGCCGGCAAG GCCGAAATCG CCAAGGTGGC GCGCATCCTG CAAAACGTCG CCGCCGCCAT CCCGGATGAC ATCAACTGGA TCATCCGTGT GGATGGGCAC ACGGACAACC AGCGCTTTGT TGGGGCGGGC AAATACGCCG ACAACTGGGA GCTGAGCCAG GGCAGGGCGC TTTCGGTTGT GCGCTACATG ATTGATGAGC TGGGCATCCC CCCGGGACGT CTTGCGGCCA ACGGATTTGG CGAGTTCCAG CCGGTCAATC CAGCTGACAC GCCTGAGGCG CGCGCGCAGA ACCGCCGAAT CGAATTGAAG CTTACGGAAC GCTGA
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Protein sequence | MALKRRTGQR FQGSIWPGFV DAMTGLLLVL MFVLTIFMVV QFVLRETISG QESELDELST EVRALAEALG VKEREASQLQ ARLGALGATL SSTRSDLDAA REQISNQTAR ISALTQERDA ARSDLATART QISDFEAQVA ALIAGRESAE AQIADLTAER DALDAARSEL LSEQEALNLA LAQLREEVDA EAEAARLAAA QTEALQALVE DLRAEGAAQS ERVSALEEAL SEEEATRLAE AAAAEALRAR LENADAELTA MTLALEEERK KAEDTLTLLA AAEAARDQLD TELEEALAAI EQAKAQVNDR DELAERLTRV LAQMEVTEST ATARVSALEA ELERVRNENA ATRERMTADL ETARQEAADT RSRLEAELTR QRAQTVETES QYQAQLRAAQ ESFDAERRAL EDRLATLEAQ ADTTRRDLED QLAALRGQAE ETRSGLETRL ARAEADLAAA RAAASSTAEE RASVEQRLLI ALEALERAQA AASDQEVLQS RLLAALAQKD DFAQEISEQR TLAEQRADLL AQARAALAEE KQISEDARRE TALLNQQVAA LREQLGGLQS LLDDFKERDA AQGIQLQSLG QDLNTALARA AAEERRRRML EEQERKRLEA ERERLANEAK DLEQYRSEFF GQLRSVLGNQ EGVRIEGDRF VFASEVLFAL GSAELSEAGK AEIAKVARIL QNVAAAIPDD INWIIRVDGH TDNQRFVGAG KYADNWELSQ GRALSVVRYM IDELGIPPGR LAANGFGEFQ PVNPADTPEA RAQNRRIELK LTER
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