| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2073 |
|---|
| Symbol | |
|---|
| ID | 4077824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2176578 |
|---|
| End bp | 2177414 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638007392 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_614067 |
|---|
| Protein GI | 99081913 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.944371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTCG ATCTGAGCGC GCTGCCGCAA GAGGTCTATC ACCGAAAGTT TGGCACCGGG
GCGCGTCATC TGGTGGCGGT GCATTGCTCG CTGGCGCATT CGGGGGCCTG GCGGGGGCTT
GTTGGGGCCT TGGGCGAGGA CCGTGTCAGC TGCACCGCAT TTGACATGCT CTCGCACGGC
AAGAGCCCGG ATTGGGACGG GCAGGGCCTG TTGCAGCGTC GCAATGCCGA GGCCGGGCTG
TGTCTCTTGG AGGCGGAGGT GGCAGAGACG GGTGGGCCGG TTGACTTGAT CGGGCATTCC
TTCGGGGCGA CGGTGGCGCT GGCCATGGCC GAGATGCGCC CGGACCTGGT GCGGAGCCTC
GTGATGATCG AGCCGGTGCT TTTTGCTGCC GCCAAGGTGC AGAACCCGGA CGCGCTCGAG
CAGATGCGTT CCGATCACAT GGCGGTGCGG AGCCCCTATG CGGCGGGCGA TGTGGAATAT
GCCACCCGGC TCTTTAACCG GGCCTGGGGA ACGGGCCATC CGAAATGGCC GGATCTGCCA
GAGCATGCCC GCGCCGCCAT GGTGCGATCG TTTCCGGCGG TGATGGACTG TGACAGCCAG
GTCTATGACG ATGCGGCCGG GCTGCTTGCG CCGGGTGCGC TCGAGGCGCT CGAGATGCCG
GTGCTGGTGA TGCAGGGCGG TGCGACGCAG CCCATCATGA CCGCGGTTAC CGACGCGCTG
TCGGCGCGGA TGCCAGAGGC GCAGATCAGC GTCATCAAGG GCGCAGGCCA TATGGTGCCG
GTGACACATC CCGAAGCGGT GGCCGAGGTG TTGCGGGCGT TCTGGTCTCA GAGATAA
|
|---|
| Protein sequence | MSLDLSALPQ EVYHRKFGTG ARHLVAVHCS LAHSGAWRGL VGALGEDRVS CTAFDMLSHG
KSPDWDGQGL LQRRNAEAGL CLLEAEVAET GGPVDLIGHS FGATVALAMA EMRPDLVRSL
VMIEPVLFAA AKVQNPDALE QMRSDHMAVR SPYAAGDVEY ATRLFNRAWG TGHPKWPDLP
EHARAAMVRS FPAVMDCDSQ VYDDAAGLLA PGALEALEMP VLVMQGGATQ PIMTAVTDAL
SARMPEAQIS VIKGAGHMVP VTHPEAVAEV LRAFWSQR
|
|---|
| |