| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_2038 |
|---|
| Symbol | |
|---|
| ID | 4077965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 2145590 |
|---|
| End bp | 2145979 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638007356 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_614032 |
|---|
| Protein GI | 99081878 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4731] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA TACTCGCGAG CATTGCGCTC ATAGTTGGGA TGAGCACTGC AGCCTTTGCT
GCCGACCCCA TCGAGGGCAC CTGGAAGACA CAGCCCGATG ACGGCTCTTA CGCACATATC
GCGATGAAGC CCTGCGGTGC GGCTCTCTGC GGCACCATCG CACGCACCTT CAACGACGGC
GGAGAATACA GCTCCCCCAA CCTTGGCAAA ACGCTGGTGA TGGACATGGT CCCGCAAGGC
GGCGGCGCCT ATGAGGGCAA GGTCTGGCGC CCGTCAAACG ATAAAATCTA CATCGGCAAG
ATGGATCTCA ACGGCAACAG CCTGCGTCTG CGGGGCTGTG TCGCGGGCGG CCTGATCTGC
TCGAAACAGA CCTGGACACG GGTGAAATAA
|
|---|
| Protein sequence | MKQILASIAL IVGMSTAAFA ADPIEGTWKT QPDDGSYAHI AMKPCGAALC GTIARTFNDG
GEYSSPNLGK TLVMDMVPQG GGAYEGKVWR PSNDKIYIGK MDLNGNSLRL RGCVAGGLIC
SKQTWTRVK
|
|---|
| |