| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1987 |
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| Symbol | |
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| ID | 4077171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 2091657 |
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| End bp | 2092220 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638007302 |
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| Product | elongation factor P |
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| Protein accession | YP_613981 |
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| Protein GI | 99081827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
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| TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGA TCAACGGCAA TGAAATCCGC CCCGGCAATG TTCTGGAGCA CAACGGCGGC
CTCTGGGCTG CGGTCAAGGT CGATCACGTC AAGCCGGGCA AGGGCGGCGC CTTTGCTCAG
GTTGAAATGA AAAACCTGCG CAACGGCTCC AAGCTCAACG AACGCTTCCG CTCTGCCGAT
AAGGTCGAGC GCGTGCGCCT CGAGCAAAAG GATCAGCAGT TCCTATATGA AACAGACGGG
ATGCTGGTGT TCATGGACAC CGAAACCTAC GAGCAGATCG AACTGCCCGC GGACCTTCTG
GGCGACCGCC GCCCGTTCCT GCAGGATGGC ATGACCATCG TGGTCGAATT CTACGAGTCC
GAGGCGCTGA ACGCGACCGT GCCGCAGAAA GTGACCTGCA AGATCGTCGA GACCGAGCCG
GTGGTCAAAG GCCAGACGGC TGCGAACTCC TTCAAGCCTG CGATCCTCGA CAATGGCGTC
AAGGTCATGG TGCCGCCCTT CGTGGGGCAG GACGAGATGA TCATCGTCAA CACCGAGACC
ATGGAATACT CCGAGCGCGC CTGA
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| Protein sequence | MPKINGNEIR PGNVLEHNGG LWAAVKVDHV KPGKGGAFAQ VEMKNLRNGS KLNERFRSAD
KVERVRLEQK DQQFLYETDG MLVFMDTETY EQIELPADLL GDRRPFLQDG MTIVVEFYES
EALNATVPQK VTCKIVETEP VVKGQTAANS FKPAILDNGV KVMVPPFVGQ DEMIIVNTET
MEYSERA
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