Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1961 |
Symbol | |
ID | 4077145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 2065279 |
End bp | 2065986 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638007276 |
Product | glutathione S-transferase-like |
Protein accession | YP_613955 |
Protein GI | 99081801 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.255462 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAG TGCTTCGCCT ACACTACGCG CCTGACAATG CCTCGCTCAT CGTGCGACTG GCACTCGAAG AGCTTGGCCT GCCCTATGAA TGCCAGCTGG TCGATCGCCG CAAAGCCGCC CAGAAAAGCG CGGCCTATCT GCAACTCAAT CCCAATGGCA CAATCCCGGT GCTCGAGACC CCGGATGGTC CCCTGTTTGA AACAGCGGCG ATCCTGCTGT GGCTGGCGGA CCAGAACGCC GCGCTGGCCC CGCAGCCCGG CTCCGCCCAG CGCGGCGCGT TCCTGACCTG GCTCTTTTGG TGCTCCAACA CGCTGCACGC CGATCTGCGC CAGTATTTCT ACCCTGAAAA AATCATTGGC CCCGAAGAGA CCCATCAGGA CCAGCTGCGC CGCGTGCTGC AGTCCCGCCT GCATCAGCAT CTGGGTATGA TCGACACAGC CCTTGTCAGA ACGCCCGGCC TCACAGATGA GGCAGACCCG ACGCTTCTTG ATCTTTATCT GCCGTGCCTC CTGCGCTGGA CCAAGCTCTA CGCCAATCGC GGCCCGAAGC CTTGGTTCGA CCTGACGTCC TACCCGGCGC TGCACGCTCT GTGCCACCGG GCCGAGGGCC GCGCCAGCAC CAAGGCGGCA CAGACCGCCG AGGGGCTTGG CCCCACGCCC TTTACCACCC CGAAATTTGC CACCCCTCCA GAAGGATCAG CCACCTAA
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Protein sequence | MTKVLRLHYA PDNASLIVRL ALEELGLPYE CQLVDRRKAA QKSAAYLQLN PNGTIPVLET PDGPLFETAA ILLWLADQNA ALAPQPGSAQ RGAFLTWLFW CSNTLHADLR QYFYPEKIIG PEETHQDQLR RVLQSRLHQH LGMIDTALVR TPGLTDEADP TLLDLYLPCL LRWTKLYANR GPKPWFDLTS YPALHALCHR AEGRASTKAA QTAEGLGPTP FTTPKFATPP EGSAT
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