Gene TM1040_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1961 
Symbol 
ID4077145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp2065279 
End bp2065986 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID638007276 
Productglutathione S-transferase-like 
Protein accessionYP_613955 
Protein GI99081801 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.255462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAG TGCTTCGCCT ACACTACGCG CCTGACAATG CCTCGCTCAT CGTGCGACTG 
GCACTCGAAG AGCTTGGCCT GCCCTATGAA TGCCAGCTGG TCGATCGCCG CAAAGCCGCC
CAGAAAAGCG CGGCCTATCT GCAACTCAAT CCCAATGGCA CAATCCCGGT GCTCGAGACC
CCGGATGGTC CCCTGTTTGA AACAGCGGCG ATCCTGCTGT GGCTGGCGGA CCAGAACGCC
GCGCTGGCCC CGCAGCCCGG CTCCGCCCAG CGCGGCGCGT TCCTGACCTG GCTCTTTTGG
TGCTCCAACA CGCTGCACGC CGATCTGCGC CAGTATTTCT ACCCTGAAAA AATCATTGGC
CCCGAAGAGA CCCATCAGGA CCAGCTGCGC CGCGTGCTGC AGTCCCGCCT GCATCAGCAT
CTGGGTATGA TCGACACAGC CCTTGTCAGA ACGCCCGGCC TCACAGATGA GGCAGACCCG
ACGCTTCTTG ATCTTTATCT GCCGTGCCTC CTGCGCTGGA CCAAGCTCTA CGCCAATCGC
GGCCCGAAGC CTTGGTTCGA CCTGACGTCC TACCCGGCGC TGCACGCTCT GTGCCACCGG
GCCGAGGGCC GCGCCAGCAC CAAGGCGGCA CAGACCGCCG AGGGGCTTGG CCCCACGCCC
TTTACCACCC CGAAATTTGC CACCCCTCCA GAAGGATCAG CCACCTAA
 
Protein sequence
MTKVLRLHYA PDNASLIVRL ALEELGLPYE CQLVDRRKAA QKSAAYLQLN PNGTIPVLET 
PDGPLFETAA ILLWLADQNA ALAPQPGSAQ RGAFLTWLFW CSNTLHADLR QYFYPEKIIG
PEETHQDQLR RVLQSRLHQH LGMIDTALVR TPGLTDEADP TLLDLYLPCL LRWTKLYANR
GPKPWFDLTS YPALHALCHR AEGRASTKAA QTAEGLGPTP FTTPKFATPP EGSAT