Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1857 |
Symbol | |
ID | 4077882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1958393 |
End bp | 1960039 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638007173 |
Product | Ppx/GppA phosphatase |
Protein accession | YP_613852 |
Protein GI | 99081698 |
COG category | [F] Nucleotide transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0248] Exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTC AGCCCGATGC CCCGCACCGC GACCTCGACA CGACGCCCCC TGTGGCGGAT GCCCCGGAGG CCGCAGCGCC TGATGCGGCG GCAGAGGATT GGGGGCCGTT TGGTCGCCCG CTTTTTGACG ATCCCGATGC CCGCGCCCTG AGCCGGGTGG GTGTGGTCGA TGTGGGGTCG AACTCTGTGC GCCTGGTGGT TTTTGACGGC GCCGCCCGCA GCCCCGCCTA TTTCTACAAC GAGAAAATCA TGTGCGGCCT GGGCGCGGGC CTCTCTGAGA CCGGCAAGCT CAACCCCAAG GGGCGCGCGC GCGCGCTCGA GGCGCTGAAA CGGTTCCAGA TGCTGGCCAA GGGGCTCTTG AGCGACCCGC TGACGGTGGT GGCCACCGCG GCGGTGCGCG ATGCCAGCGA CGGGCCGGAG TTCTGCGCCG AGGTCGAGGC CGCCACGGGC CTGCGCATCC GCGTCATCAC CGGCGAGGAA GAGGCGCGGC TCTCGGCGCA AGGCGTGCTC TTGGGCTGGC CCGGCGCCTA TGGGCTGATC TGCGATATCG GCGGATCCTC GATGGAGCTT GCGGAAATTC AGGACGGCGA GGTCGGCCGA TGCGTGACCT CCAATCTCGG GCCCCTGAAG CTCAAGGATA TCAAGGGCGG GCGCAAGGGA CGCAAGGCGC ATATCGACGA GGTGATGGCC TCTTTGCGCG ACCAGTTGGG CGATCAGCGG GATCGCCTGT TCCTCGTGGG GGGGAGCTGG CGTGCGATTG CGCGGCTCGA CATGCTGCGG CGCAACTATC CGCTGACGGT GCAGCACGAA TACCGCATGA CCGCCAAGGA CGTGCGCGAG ACGATCAAGT TCATCGAACA GAACGACCTT GAGAAACTGC GCTCTGACTG CGGGGTCTCC TCGGCGCGGA TGGCGCTTGT GCCCTATGCA ATCGACGTGT TGGCGCGTCT CATCAAGACG TTCCGCCCCA AGGACATTGC GATTTCCAGC TATGGCATCC GCGAGGGGCT TTTGTATGAG CAGATGCCGG ATCGGCTGCG CCAACGCGAT CCGCTCATTG AAGCGGCGCG TTTTGCCGAG GCCAAGGACG CGCGAGTTCC GGGCTTTGGG AAGACGCTCT ACACCTTTGT AAAACCGCTG TTTTCCGGCG CGCCCTACGC CAAGATGCGG CTCGTCAAAG CGGCCTGCGT GCTGCATGAC GTAAGCTGGC GCGCGCATCC CGATTATCGC GCGGAGGTCT GTTTTGACAA CGCCACCCGC GCCAACCTTG GTGGGCTCAA ACATTCCGAG CGGATCTTTC TGGGGCTGGC GCTGCTGCAT CGCTATCGCA ACAAGCGTCA GGGCACCCAT TTTGAGCATC TCTATGATCT GCTGCCGTCC GAAAAGCAGA AAGAGGCGGA AATTCTAGGC AAGGCGATGC GCTTTGGCGC GATGCTGATG GTGGGCGAGG ATCAGGACAT TGGCCGCCTG CGCTGGCAGC CGCGCAAACG CACGCTGCAT GTGGAACTCC CCGCAGAGAG CGCGGCGCTC TTTGGGGAGG TGGCGCAGTC GCGGCTGATG TCCCTCGTCA ACACACTCAA GGCCGAAGTC CGTGTGAGCG TTGCAGGCCG ACGCGGCGCG CTGCTGGAAA AAGACGCGCG CGACTGA
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Protein sequence | MTIQPDAPHR DLDTTPPVAD APEAAAPDAA AEDWGPFGRP LFDDPDARAL SRVGVVDVGS NSVRLVVFDG AARSPAYFYN EKIMCGLGAG LSETGKLNPK GRARALEALK RFQMLAKGLL SDPLTVVATA AVRDASDGPE FCAEVEAATG LRIRVITGEE EARLSAQGVL LGWPGAYGLI CDIGGSSMEL AEIQDGEVGR CVTSNLGPLK LKDIKGGRKG RKAHIDEVMA SLRDQLGDQR DRLFLVGGSW RAIARLDMLR RNYPLTVQHE YRMTAKDVRE TIKFIEQNDL EKLRSDCGVS SARMALVPYA IDVLARLIKT FRPKDIAISS YGIREGLLYE QMPDRLRQRD PLIEAARFAE AKDARVPGFG KTLYTFVKPL FSGAPYAKMR LVKAACVLHD VSWRAHPDYR AEVCFDNATR ANLGGLKHSE RIFLGLALLH RYRNKRQGTH FEHLYDLLPS EKQKEAEILG KAMRFGAMLM VGEDQDIGRL RWQPRKRTLH VELPAESAAL FGEVAQSRLM SLVNTLKAEV RVSVAGRRGA LLEKDARD
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