Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1804 |
Symbol | |
ID | 4076950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1895802 |
End bp | 1896818 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638007119 |
Product | hypothetical protein |
Protein accession | YP_613799 |
Protein GI | 99081645 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.269337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0111784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACG TGACCAACGA CACCCTTTCC CATTATGCGC TCCCGGCCTA CCCGGCCGAG CAGTTTTGCG TGGACATCGG CGCCAACGCG GGCGACCCGA TTGGGATTCT GGATGATTTG GTGATGGATG ACATCTACGA GCTCACCAGT GATGCGCGCC TGCGACGGCT CGCCTTTGGG GTGTCAACAG AGGGCACGAT CACCCTCCAC TCCGAGAGCG AGATGGGCCA GGACGGGGCG CGACTGCATC TGGATTGCGC CGTCACACTG ATGCCCGACC TGGGCAGCGC CATCGAGGCG CTGATCGCGG TTGAGGTGGA TAATGAGGGG TTGATAGCCC GGCTCTACCT GATCCCGCAG GCCCCACTTG CGCAGGGCAC GGGCTATCGT CTGGTGCGCG CCAGCCGCGA GCCGGTCTGG ACACGTTTGG CGCAACTCAG CTGTGTGGCC TTTTCGCGCG GCACGCATAT CACGATGGGC ACGGGAGAGC AGCGCCCGAT TGAGATGCTG CGCGCCGGCG ACCGGGTCTT GACCCGCAAC AGTGGCGCGC GCCGCATCAC CTGGGTGGGT CACACCACCG TCCGCGCGGT CGGAGAAATG GCGCCCATCC TGATCCGCCA AGGGGCGCTC AACAATGCGC GCGACCTTTT GGTGAGCCCG GACCACCGGC TCATGATCTA TCAGCGATCA GATGCGCTCG GGGCGGGACG GAATGAATTG ATGATCCGCG CCCGCGATCT TGTGAATGGC GACAGCGTGG TGGTTCAGGA CGGCGGCTTT GTGGACTACT ATCAGATCCT GTTTGACCGC CATCACATCA TCTATGCCGA GGGCATTGCC GCGGAATCGA TGCTGGTGGA CCCGGTCACG CGTCCAGCCC TCCCCGAAGA GGTGCAGCAA CGTCTGACGC AGCCCCGCCG GCATGGAACG CGCGGCGATC ACGGCTTGGA AATCCGGCGC CCAATGCTCA GTCACCCAGA CACCGTAGAC TTGCTCAAAC GCGCCTCGTT GCGCTGA
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Protein sequence | MTDVTNDTLS HYALPAYPAE QFCVDIGANA GDPIGILDDL VMDDIYELTS DARLRRLAFG VSTEGTITLH SESEMGQDGA RLHLDCAVTL MPDLGSAIEA LIAVEVDNEG LIARLYLIPQ APLAQGTGYR LVRASREPVW TRLAQLSCVA FSRGTHITMG TGEQRPIEML RAGDRVLTRN SGARRITWVG HTTVRAVGEM APILIRQGAL NNARDLLVSP DHRLMIYQRS DALGAGRNEL MIRARDLVNG DSVVVQDGGF VDYYQILFDR HHIIYAEGIA AESMLVDPVT RPALPEEVQQ RLTQPRRHGT RGDHGLEIRR PMLSHPDTVD LLKRASLR
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