| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1769 |
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| Symbol | |
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| ID | 4076798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1860620 |
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| End bp | 1861903 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638007084 |
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| Product | VWA containing CoxE-like |
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| Protein accession | YP_613764 |
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| Protein GI | 99081610 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3552] Protein containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.606293 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGAAT ACCCCTCGCT TGCGATCTCG GACGATCCCA AACTCGCCGC GAATATCACC
CATTTTGCGC GAGCTCTGCG CAAGGCCGGA CTCAATGTTG GTACCGGGCG GGTGCTCGAT
GCGATCAGGG CTGTTGAGGC CGCCGGTTTC ACGTCGCGGC GCGATTTTTA CTGGACCTTG
CACGCGTGTT TTGTCTCCCG TCCCGAAGAG CGCGTGGTCT TTGGGCAGGT GTTTCGTCTC
TTCTGGCGTG ACCCCCGGTT TCTGGAACAT ATGATGGCGG CGATGCTGCC CGCGATCCGA
GGCGTACAGC AGGAACGCGC GGCCAAACCT GCCGAGACCC GTGCTGCCGA GGCATTGCTG
GATGGGCAAC TGCCCGAACA TCCCGAGGAA TCACCCGAGG CCACGGACGA AGCAGAGGAG
ATCGAAATCG ACGCCGCAAT GACCCTCTCG GCCGAAGAGC GGCTCAAGAC GCTTGATTTT
GAACAGATGA CCACCGAGGA AATCCAGCAG GCCAAGCGGA TGCTTGCCAC ACTGAGATTG
CCGATTGCGC CTCTGAAAAC GCGCCGCCAT CAACCCGCGC CGCAAGGTGC AAGGCCGGAT
TGGCGGCGCA CGATGCGTGG TGCGGGCCGC ACCGGGGGCG AAATCGCGCG CATCGCCCGC
AGCAAACGCG CCGAGCGGTT TCCAAATCTT GTGGTTCTCT GCGACATTTC CGGCTCCATG
AGCCAGTACA GCCGCATGGT GCTGCATTTT CTGCATGCGG TCGCCAATCG ACCCGCTGAC
GGGCGGCAGG GGCGCTGGGC GCAGGTGCAT GGTTTCACCT TCGGCACCCG GCTCACCAAT
ATCTCGCGAC ATCTGAAGCA ACGCGATGTG GATGCGGCGC TCGCGGCGGC GGGTGCCGAG
GCGCAGGACT GGCAGGGAGG GACGCGGATC GGTGGGTGCC TGCATGCCTT CAACCGGGAC
TGGTCGCGCC GAGTCATGGG GCAGGGGGCG GTGGTGCTCC TGGTAAGTGA TGGGCTGGAC
CGCGACGTCC CAGAGACCCT GGCGCTGGAG ATGCAGCGCC TGCGGCTTTC TGCAGGGCGT
CTTGTCTGGC TCAACCCTTT GCTCCGGTGG GATGGGTTCC TGCCACGCGC CCGCGGCATC
CAGGCGATGC TGCCCCATGT GGACAGCTTT CGCGCAGGTC ACAATATTGC GTCGCTTGAA
GATCTTGCAC AAGCGCTCTC GCGGCCGGAT GACACTGGCG AAAAGCTGCG CCTGATGGCC
ATGATGCAGG AGGAACGCGC GTGA
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| Protein sequence | MVEYPSLAIS DDPKLAANIT HFARALRKAG LNVGTGRVLD AIRAVEAAGF TSRRDFYWTL
HACFVSRPEE RVVFGQVFRL FWRDPRFLEH MMAAMLPAIR GVQQERAAKP AETRAAEALL
DGQLPEHPEE SPEATDEAEE IEIDAAMTLS AEERLKTLDF EQMTTEEIQQ AKRMLATLRL
PIAPLKTRRH QPAPQGARPD WRRTMRGAGR TGGEIARIAR SKRAERFPNL VVLCDISGSM
SQYSRMVLHF LHAVANRPAD GRQGRWAQVH GFTFGTRLTN ISRHLKQRDV DAALAAAGAE
AQDWQGGTRI GGCLHAFNRD WSRRVMGQGA VVLLVSDGLD RDVPETLALE MQRLRLSAGR
LVWLNPLLRW DGFLPRARGI QAMLPHVDSF RAGHNIASLE DLAQALSRPD DTGEKLRLMA
MMQEERA
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