| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1758 |
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| Symbol | |
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| ID | 4076787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1848717 |
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| End bp | 1850384 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638007073 |
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| Product | nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like |
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| Protein accession | YP_613753 |
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| Protein GI | 99081599 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.977671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAGT ACAACGACTT CGACTCCGCC TTTCTCGCAG AGCGCAATCG CCAGTTCCGT
GCCCAGGTGG AGCGCCGCAT CGCGGGCGCG CTGACCGAGG ATGAGTTCAA GCCGCTGCGC
CTGATGAACG GTCTCTATCT TCAGCTGCAC GCCTATATGC TGCGGGTTGC GATCCCCTAT
GGCACGCTGA ACCCCGATCA GATGCGCGCG CTCGCACTGC TCGCTGAGAA GTGGGACAAG
GGCTACGGCC ATTTCACCAC GCGTCAGAAC ATCCAGTACA ACTGGCCCAA ACTGAAGGAT
GTGCCGGACA TGCTGGACGC GCTGGCAGAG GTGAACCTGC ATGCGATCCA GACCTCGGGC
AACACGATCC GTAACGTGAC GGCCGACCAT TTCGCCGGCG CTGCCGCAGA TGAGATCGAA
GATCCCCGCC CCATCGCAGA GCTGATCCGC CAGTGGTCCA CCGATCACCC GGAGTTTCAG
TTCATGGGCC GTAAGTTCAA GATCGCCGTC TCCGGGGCCG CCAACGATCG CGCCGTCCTG
AAGGCACATG ACTTGGCGAT CAAGATCGTC AAGAACGAGG ACGGCGAAGT GGGCTACCAG
GTGCTGGTCG GCGGTGGCCT TGGCCGTACG CCGATGATCG GCAAGGTGCT CAATGACTTT
GTCGCCGCCG ATGACCTCCT GCCCTACATC GAGAGCGTGA TCTCGGTCTG GAACCAGCTT
GGCCGTCGCG ACAACAAGTA CAAGGCCCGC ATCAAGATCA CCGTGCACGA GCTCGGACTG
GAGAAGATCC GCGAGCTGAC CGAAGAGCGT TTTGCGCAAG TGCGCCCGAC CTTTGGCGGC
GCAGATCAAG CGTTGTTTCA GGACATCAAG CGCCACTTTG CCGCGCCCGA GTTCCGCAGC
GAAGGCACCG AGGTCTTTGA CGCCGCTTAT GACTCCGATC CTGTGTTCCG CGCCTGGGCC
GACACCAACC TCGCCGAACA CAAGGCGCCG GGGCATGCGA TCGCGACCAT CTCGATCAAG
AAACATGGCG CCACGCCGGG CGATGCAACC GCCGCGCAGA TGTACGCCAT GGCAGATATC
GCCGAAGAGT TCGCCTATGG CGAGCTGCGC ATCAGCCACG AGCAGAACGT GATCCTGCCG
CATGTGCACA AGAACGATCT GCCCGCAATC CACGCGCGTC TGAAGGCGGC GGATCTGGCG
ACCGCGAACA TCGGCCTGAT CTCGGACATC ATTGCCTGCC CGGGCATGGA TTACTGCGCG
CTGGCCACCG CCCGCTCGAT CCCCGTGGCG CAGGAAATCG CCACCCGGTT CGAGGACCTG
AAACTCGAGC ACGACATTGG CCATCTGCAG ATCAAGATCT CTGGCTGCAT CAACGCCTGC
GGCCACCACC ATGTCGGACA CATCGGCATC CTTGGTCTGG ATCGCGCGGG CGTCGAGAAC
TATCAGATCA CGCTGGGTGG GGATGCGACC GAAACTGCAG CCATCGGCAC GCGGACCGGA
CCGGGCTTTG CCTATGACGA AATCGTCCCC GCGGTGGAGC GCATCGTCGA AACCTATCTG
GAGCAACGCG AGAGCGCCGA AGAAGAGTTC CTGCAAACCT ACCGCCGCGT CGGCATGGAG
CCCTTCAAGG CGGCGCTCTA CCCGGCCTCC GAGAAAAAGG TGGCCTGA
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| Protein sequence | MYKYNDFDSA FLAERNRQFR AQVERRIAGA LTEDEFKPLR LMNGLYLQLH AYMLRVAIPY
GTLNPDQMRA LALLAEKWDK GYGHFTTRQN IQYNWPKLKD VPDMLDALAE VNLHAIQTSG
NTIRNVTADH FAGAAADEIE DPRPIAELIR QWSTDHPEFQ FMGRKFKIAV SGAANDRAVL
KAHDLAIKIV KNEDGEVGYQ VLVGGGLGRT PMIGKVLNDF VAADDLLPYI ESVISVWNQL
GRRDNKYKAR IKITVHELGL EKIRELTEER FAQVRPTFGG ADQALFQDIK RHFAAPEFRS
EGTEVFDAAY DSDPVFRAWA DTNLAEHKAP GHAIATISIK KHGATPGDAT AAQMYAMADI
AEEFAYGELR ISHEQNVILP HVHKNDLPAI HARLKAADLA TANIGLISDI IACPGMDYCA
LATARSIPVA QEIATRFEDL KLEHDIGHLQ IKISGCINAC GHHHVGHIGI LGLDRAGVEN
YQITLGGDAT ETAAIGTRTG PGFAYDEIVP AVERIVETYL EQRESAEEEF LQTYRRVGME
PFKAALYPAS EKKVA
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